neXtProt ontology

Classes ↑

Absorption max
Absorption note
Active site
Activity regulation
Allergen
Allergen name
Annotation
Antibody mapping
Beta strand
Bgee developmental stage term
Binary interaction
Binding site
Biophysicochemical property
CD Antigen name
Calcium-binding region
Catalytic activity
Caution
Cellular component
Cleavage site
Cleaved region name
Cofactor
Cofactor information
Coiled-coil region
Compositionally biased region
Consortium
Cross-link
Database
Developmental stage expression information
Disease
Disease-related variant
Disulfide bond
DNA-binding region
Domain
Domain information
Electrophysiological parameter
Protein
Enzyme classification
Enzyme classification number
Enzyme classification name
Evidence
Evidence code term
Experimental context
Expression
Expression information
Expression profile
Family name
Function
Function information
Functional region name
Gene
Gene name
General Annotation
Glycosylation site
GO biological process
GO biological process term
GO cellular component
GO cellular component term
GO molecular function
GO molecular function term
GO qualifier
Helix
Protein record history
Identifier
Induction
Initiator methionine
Interacting region
Interaction
Interaction information
Interaction mapping
International Non proprietary Name
Intramembrane region
Isoform
Protein isoform name
Kinetic KM
Kinetic note
Kinetic Vmax
Large scale publication
Lipid moiety-binding region
Mammalian phenotype
Mammalian phenotype term
Mapping
Mature protein
Medical
MeSH anatomy term
MeSH term
Metal binding site
Miscellaneous
Miscellaneous region
Miscellaneous site
Mitochondrial transit peptide
Modified residue
Mutagenesis
Name
NCI Metathesaurus term
NCI thesaurus term
neXtProt human anatomy term
Cellosaurus term
neXtProt domain term
neXtProt family term
neXtProt history
Ion channel electrophysiology term
neXtProt metal term
neXtProt modification effect term
neXtProt protein property term
neXtProt topology term
Non-consecutive residue
Non-standard amino acid term
Non-terminal residue
Nucleotide phosphate-binding region
ORF name
Observed expression
MIM term
Organelle term
Pathway
PDB mapping
Peptide mapping
Peroxisome transit peptide
Person
PH dependence
Pharmaceutical
Phenotype variation
Positional annotation
Processing product.
Maturation peptide
Protein existence
Protein name
Protein property
Protein sequence
Proteoform
PSI-MI Molecular Interaction term
PTM
PTM information
Publication
Quality qualifier
Redox potential
Region
Repeat
Secondary structure
Selenocysteine
Sequence caution
Sequence conflict
Severity
Short name
Short sequence motif
Signal peptide
Site
Small molecule interaction
Source
SRM peptide mapping
Subcellular location
Subcellular location information
Temperature dependence
Term
Topological domain
Topology
Transmembrane region
Transport activity
Turn
UniPathway term
UniProtKB disease term
UniProt history
UniProtKB keyword annotation
UniProtKB keyword
UniProtKB post-translational modification term
UniProtKB subcellular location term
UniProtKB subcellular orientation term
UniProtKB subcellular topology term
Variant
Variant information
Version
Cross reference
Zinc finger region

Absorption max^c # Classes

URI	`http://nextprot.org/rdf#AbsorptionMax`
Is Defined By	http://nextprot.org/rdf
Description	Wavelength at which maximal light absorption by the photoreactive protein occurs. Other observed absorbance maxima (of lesser importance), lambda(max) for light emission, experimental or environmental remarks may also be included.
Super-classes	Biophysicochemical property^c
In range of	absorption max^op

Absorption note^c # Classes

URI	`http://nextprot.org/rdf#AbsorptionNote`
Is Defined By	http://nextprot.org/rdf
Description	Note with additional information on light absorption by the photoreactive protein.
Super-classes	Biophysicochemical property^c
In range of	absorption note^op

Active site^c # Classes

URI	`http://nextprot.org/rdf#ActiveSite`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid(s) directly involved in the catalytic activity of the protein.
Super-classes	Site^c
In range of	active site^op

Activity regulation^c # Classes

URI	`http://nextprot.org/rdf#ActivityRegulation`
Is Defined By	http://nextprot.org/rdf
Description	Mechanisms which regulate the activity of the protein, including the components which regulate (by activation or inhibition) the reaction.
Super-classes	Interaction^c
In range of	activity regulation^op

Allergen^c # Classes

URI	`http://nextprot.org/rdf#Allergen`
Is Defined By	http://nextprot.org/rdf
Description	Protein causing an allergic reaction.
Super-classes	Medical^c
In range of	allergen^op

Allergen name^c # Classes

URI	`http://nextprot.org/rdf#AllergenName`
Is Defined By	http://nextprot.org/rdf
Description	Allergen name.
Super-classes	Name^c

Annotation^c # Classes

URI	`http://nextprot.org/rdf#Annotation`
Is Defined By	http://nextprot.org/rdf
Description	A statement about a protein.
Sub-classes	Positional annotation^c General Annotation^c
In domain of	evidence^op negative evidence^op

Antibody mapping^c # Classes

URI	`http://nextprot.org/rdf#AntibodyMapping`
Is Defined By	http://nextprot.org/rdf
Description	Fragment of the protein or PrESTs (Protein Epitope Signature Tags) used to generate antibodies by the Human Protein Atlas project.
Super-classes	Mapping^c
In domain of	antibody uniqueness^dp antibody name^dp
In range of	antibody mapping^op

Beta strand^c # Classes

URI	`http://nextprot.org/rdf#BetaStrand`
Is Defined By	http://nextprot.org/rdf
Description	Beta strand within the protein structure.
Super-classes	Secondary structure^c
In range of	beta strand^op

Bgee developmental stage term^c # Classes

URI	`http://nextprot.org/rdf#BgeeDevelopmentalStageCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the Bgee controlled vocabulary of human developmental stages.
Super-classes	Term^c
In range of	developmental stage^op

Binary interaction^c # Classes

URI	`http://nextprot.org/rdf#BinaryInteraction`
Is Defined By	http://nextprot.org/rdf
Description	Interaction involving two proteins.
Super-classes	Interaction^c
In domain of	self-interaction^dp
In range of	binary interaction^op

Binding site^c # Classes

URI	`http://nextprot.org/rdf#BindingSite`
Is Defined By	http://nextprot.org/rdf
Description	Binding site for any chemical group (co-enzyme, prosthetic group, etc.).
Super-classes	Site^c
In range of	binding site^op

Biophysicochemical property^c # Classes

URI	`http://nextprot.org/rdf#BiophysicochemicalProperty`
Is Defined By	http://nextprot.org/rdf
Description	Biophysical and chemical properties of the protein, such as maximal absorption, kinetic parameters, pH dependence, redox potential and temperature dependence.
Super-classes	General Annotation^c
Sub-classes	Redox potential^c Kinetic Vmax^c Temperature dependence^c PH dependence^c Kinetic KM^c Absorption max^c Kinetic note^c Absorption note^c
In range of	biophysicochemical property^op

CD Antigen name^c # Classes

URI	`http://nextprot.org/rdf#CDAntigenName`
Is Defined By	http://nextprot.org/rdf
Description	Antigen name according to the cluster of differentiation (CD) nomenclature.
Super-classes	Name^c

Calcium-binding region^c # Classes

URI	`http://nextprot.org/rdf#CalciumBindingRegion`
Is Defined By	http://nextprot.org/rdf
Description	Calcium binding region within the protein.
Super-classes	Region^c
In range of	calcium-binding region^op

Catalytic activity^c # Classes

URI	`http://nextprot.org/rdf#CatalyticActivity`
Is Defined By	http://nextprot.org/rdf
Description	Reaction(s) catalyzed by the protein.
Super-classes	Function^c
In range of	catalytic activity^op

Caution^c # Classes

URI	`http://nextprot.org/rdf#Caution`
Is Defined By	http://nextprot.org/rdf
Description	Warning about possible errors and/or grounds for confusion.
Super-classes	General Annotation^c
In range of	caution^op

Cellular component^c # Classes

URI	`http://nextprot.org/rdf#CellularComponent`
Is Defined By	http://nextprot.org/rdf
Description	Cellular component where the protein is localized.
Super-classes	General Annotation^c
Sub-classes	Subcellular location^c Subcellular location information^c GO cellular component^c
In range of	cellular component^op

Cleavage site^c # Classes

URI	`http://nextprot.org/rdf#CleavageSite`
Is Defined By	http://nextprot.org/rdf
Description	Natural proteolytic cleavage site in the protein.
Super-classes	Site^c
In range of	cleavage site^op

Cleaved region name^c # Classes

URI	`http://nextprot.org/rdf#CleavedRegionName`
Is Defined By	http://nextprot.org/rdf
Description	Cleaved region name.
Super-classes	Name^c

Cofactor^c # Classes

URI	`http://nextprot.org/rdf#Cofactor`
Is Defined By	http://nextprot.org/rdf
Description	Non-protein substance required for enzyme activity.
Super-classes	Interaction^c
In range of	cofactor^op

Cofactor information^c # Classes

URI	`http://nextprot.org/rdf#CofactorInfo`
Is Defined By	http://nextprot.org/rdf
Description	Information on protein cofactor(s).
Super-classes	Interaction^c
In range of	cofactor information^op

Coiled-coil region^c # Classes

URI	`http://nextprot.org/rdf#CoiledCoilRegion`
Is Defined By	http://nextprot.org/rdf
Description	Coiled-coil region within the protein.
Super-classes	Region^c
In range of	coiled-coil region^op

Compositionally biased region^c # Classes

URI	`http://nextprot.org/rdf#CompositionallyBiasedRegion`
Is Defined By	http://nextprot.org/rdf
Description	Region of compositional bias within the protein, in which a particular type of amino acid is over-represented.
Super-classes	Region^c
In range of	compositionally biased region^op

Consortium^c # Classes

URI	`http://nextprot.org/rdf#Consortium`
Is Defined By	http://nextprot.org/rdf
Description	Name of a specific consortium, committee, or study group.

Cross-link^c # Classes

URI	`http://nextprot.org/rdf#CrossLink`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid(s) participating in covalent linkage between proteins.
Super-classes	PTM^c
In range of	cross-link^op

Database^c # Classes

URI	`http://nextprot.org/rdf#Database`
Is Defined By	http://nextprot.org/rdf
Description	Database cross-referenced by neXtProt.
In domain of	category^dp
In range of	provenance^op from database^op
Members	db:ProteomicsDB db:GlyGen db:MetOSite db:MalaCards db:MaxQB db:GOA db:REBASE db:neXtProtSubmission db:eggNOG db:CPTC db:ExpressionAtlas db:BioMuta db:EMBL-CDS db:PRO db:PharmGKB db:PROSITE-ProRule db:Affymetrix db:SRMAtlas db:CTD db:UniLectin db:SignaLink db:SABIO-RK db:Antibodypedia db:PathwayCommons db:SFLD db:Bgee db:ChiTaRS db:Orphanet db:PhylomeDB db:gnomAD db:MassIVE db:VEuPathDB db:DYP db:BioGRID-ORCS db:GeneTree db:ChEBI db:SAM db:KEGGPathway db:HOGENOM db:SIGNOR db:TIGRFAMs db:MINT db:InterPro db:PIR db:UCD-2DPAGE db:UCSC db:PRIDE db:HPRD db:ChEMBL db:ESTHER db:MGC db:PIRNR db:DOI db:PCDDB db:PubMed db:DisGeNET db:BioCyc db:GFP-cDNA db:SMR db:SWISS-2DPAGE db:GeneDB db:RuleBase db:BRENDA db:IntAct db:DKFZ db:OpenTargets db:BindingDB db:GeneWiki db:UniProtKB db:KIAA db:HAMAP-Rule db:STRING db:PDB db:DisProt db:CPTAC db:GO_REF db:IMGT_GENE-DB db:MIM db:neXtProt db:iPTMnet db:DEPOD db:UniProt db:GeneID db:PANTHER db:DIP db:DOSAC-COBS-2DPAGE db:HAMAP db:DNASU db:Proteomes db:Cosmic db:OGP db:NCBI_Taxonomy db:RNAct db:PDBsum db:PeptideAtlas db:KEGG db:REPRODUCTION-2DPAGE db:IDEAL db:HGNC db:SASBDB db:BioGRID db:CAZy db:DECIPHER db:GeneCards db:PhosphoSitePlus db:jPOST db:Pfam db:FLJ db:PATRIC db:PaxDb db:dbSNP db:CORUM db:EPD db:DDBJ db:DrugCentral db:Others db:GenomeRNAi db:PRINTS db:Allergome db:PIRSR db:DMDM db:Ensembl db:TopDownProteomics db:CCDS db:ELM db:SwissPalm db:UniPathway db:Rhea db:InParanoid db:TreeFam db:SUPFAM db:DrugBank db:LOC db:CDD db:OrthoDB db:SwissLipids db:Illumina db:EvolutionaryTrace db:GlyConnect db:GuidetoPHARMACOLOGY db:PROSITE db:SMART db:EMBL db:ABCD db:Gene3D db:Reactome db:BMRB db:Pharos db:MoonProt db:IMAGE db:PeroxiBase db:RefSeq db:Genevisible db:NIAGADS db:MEROPS db:CarbonylDB db:GeneReviews db:IPI db:ComplexPortal db:OMA db:HPA db:MoonDB db:PIRSF db:MGI db:TCDB

Developmental stage expression information^c # Classes

URI	`http://nextprot.org/rdf#DevelopmentalStageInfo`
Is Defined By	http://nextprot.org/rdf
Description	Information describing the expression of the gene product(s) at various stages of a cell, tissue or organism development.
Super-classes	Expression^c
In range of	developmental stage expression information^op

Disease^c # Classes

URI	`http://nextprot.org/rdf#Disease`
Is Defined By	http://nextprot.org/rdf
Description	Disease associated with variations in the gene encoding the protein.
Super-classes	Medical^c

Disease-related variant^c # Classes

URI	`http://nextprot.org/rdf#DiseaseRelatedVariant`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid variation in the protein associated with disease(s).
Super-classes	Positional annotation^c
In range of	disease-related variant^op

Disulfide bond^c # Classes

URI	`http://nextprot.org/rdf#DisulfideBond`
Is Defined By	http://nextprot.org/rdf
Description	Cysteine(s) participating in disulfide bonds.
Super-classes	PTM^c
In range of	disulfide bond^op

DNA-binding region^c # Classes

URI	`http://nextprot.org/rdf#DnaBindingRegion`
Is Defined By	http://nextprot.org/rdf
Description	DNA-binding region within the protein.
Super-classes	Region^c
In range of	dna-binding region^op

Domain^c # Classes

URI	`http://nextprot.org/rdf#Domain`
Is Defined By	http://nextprot.org/rdf
Description	Region within the protein with a characteristic three-dimensional structure or fold.
Super-classes	Region^c
In range of	domain^op

Domain information^c # Classes

URI	`http://nextprot.org/rdf#DomainInfo`
Is Defined By	http://nextprot.org/rdf
Description	Information describing domain(s).
Super-classes	General Annotation^c
In range of	domain information^op

Electrophysiological parameter^c # Classes

URI	`http://nextprot.org/rdf#ElectrophysiologicalParameter`
Is Defined By	http://nextprot.org/rdf
Description	Biophysical properties of a ion channel.
Super-classes	General Annotation^c

Protein^c # Classes

URI	`http://nextprot.org/rdf#Entry`
Is Defined By	http://nextprot.org/rdf
Description	Sequence(s) of protein isoform(s) encoded by one or more human genes, and associated information.
In domain of	existence^op swissprot page^dp family name^op isoform count^dp isoform^op history^op gene^op
In range of	best gene mapping^op

Enzyme classification^c # Classes

URI	`http://nextprot.org/rdf#EnzymeClassification`
Is Defined By	http://nextprot.org/rdf
Description	Enzymatic activity of the protein annotated using the Enzyme Commission (EC) classification
Super-classes	General Annotation^c
In range of	enzyme classification^op

Enzyme classification number^c # Classes

URI	`http://nextprot.org/rdf#EnzymeClassificationCv`
Is Defined By	http://nextprot.org/rdf
Description	Number from the Enzyme Commission (EC) classification scheme for enzymes.
Super-classes	Term^c

Enzyme classification name^c # Classes

URI	`http://nextprot.org/rdf#EnzymeName`
Is Defined By	http://nextprot.org/rdf
Description	Name from the Enzyme Commission (EC) classification scheme for enzymes.
Super-classes	Name^c

Evidence^c # Classes

URI	`http://nextprot.org/rdf#Evidence`
Is Defined By	http://nextprot.org/rdf
Description	Information supporting an annotation concerning the protein.
In domain of	allele count^dp experimental context^op homozygote allele count^dp number of experiments^dp allele number^dp interaction detection method^dp negative^dp expression score^dp from database^op allele frequency^dp go qualifier^dp observed expression^op severity^dp assigned by^fp evidence code^op
In range of	negative evidence^op evidence^op

Evidence code term^c # Classes

URI	`http://nextprot.org/rdf#EvidenceCodeOntologyCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the ECO controlled vocabulary of evidence and assertion methods.
Super-classes	Term^c
In range of	evidence code^op

Experimental context^c # Classes

URI	`http://nextprot.org/rdf#ExperimentalContext`
Is Defined By	http://nextprot.org/rdf
Description	Experimental context in which the protein was studied.
In domain of	metadata^dp developmental stage^op cell line^op tissue^op
In range of	experimental context^op

Expression^c # Classes

URI	`http://nextprot.org/rdf#Expression`
Is Defined By	http://nextprot.org/rdf
Description	Expression of the gene product(s) in cells or in tissues.
Super-classes	General Annotation^c
Sub-classes	Developmental stage expression information^c Expression information^c Expression profile^c
In range of	expression^op

Expression information^c # Classes

URI	`http://nextprot.org/rdf#ExpressionInfo`
Is Defined By	http://nextprot.org/rdf
Description	Information on the expression of the gene product(s) in cells or in tissues.
Super-classes	Expression^c
In range of	expression information^op

Expression profile^c # Classes

URI	`http://nextprot.org/rdf#ExpressionProfile`
Is Defined By	http://nextprot.org/rdf
Description	Expression of the gene product(s) in a given organ, tissue, cell type, fluid or gestational structure.
Super-classes	Expression^c
In range of	undetected expression^op detected expression^op medium expression^op expression profile^op low expression^op high expression^op

Family name^c # Classes

URI	`http://nextprot.org/rdf#FamilyName`
Is Defined By	http://nextprot.org/rdf
Description	Information on the family of proteins to which the protein belongs.
Super-classes	Name^c
In range of	family name^op

Function^c # Classes

URI	`http://nextprot.org/rdf#Function`
Is Defined By	http://nextprot.org/rdf
Description	Function(s) of the protein.
Super-classes	General Annotation^c
Sub-classes	Pathway^c Catalytic activity^c GO biological process^c GO molecular function^c Function information^c Transport activity^c
In range of	function^op

Function information^c # Classes

URI	`http://nextprot.org/rdf#FunctionInfo`
Is Defined By	http://nextprot.org/rdf
Description	Information on the function(s) of the protein.
Super-classes	Function^c
In range of	function information^op

Functional region name^c # Classes

URI	`http://nextprot.org/rdf#FunctionalRegionName`
Is Defined By	http://nextprot.org/rdf
Description	Functional region name
Super-classes	Name^c

Gene^c # Classes

URI	`http://nextprot.org/rdf#Gene`
Is Defined By	http://nextprot.org/rdf
Description	Information about the gene(s) encoding the protein isoform sequence(s) described in the entry.
In domain of	chromosomal band^dp chromosome^dp chromosome strand^dp begin^dp best gene mapping^op
In range of	gene^op

Gene name^c # Classes

URI	`http://nextprot.org/rdf#GeneName`
Is Defined By	http://nextprot.org/rdf
Description	Gene name.
Super-classes	Name^c

General Annotation^c # Classes

URI	`http://nextprot.org/rdf#GeneralAnnotation`
Is Defined By	http://nextprot.org/rdf
Description	Annotation describing a biological aspect of the protein.
Super-classes	Annotation^c
Sub-classes	Protein property^c Medical^c PTM information^c Expression^c Induction^c Caution^c Cellular component^c Mammalian phenotype^c Miscellaneous^c Electrophysiological parameter^c Variant information^c Domain information^c Phenotype variation^c Interaction^c Enzyme classification^c UniProtKB keyword annotation^c Function^c Sequence caution^c Biophysicochemical property^c
In range of	general annotation^op

Glycosylation site^c # Classes

URI	`http://nextprot.org/rdf#GlycosylationSite`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid covalently attached to a glycan group (mono-, di-, or polysaccharide).
Super-classes	PTM^c
In range of	glycosylation site^op

GO biological process^c # Classes

URI	`http://nextprot.org/rdf#GoBiologicalProcess`
Is Defined By	http://nextprot.org/rdf
Description	Involvement of the protein in a larger process, or ‘biological program’.
Super-classes	Function^c
In range of	go biological process^op

GO biological process term^c # Classes

URI	`http://nextprot.org/rdf#GoBiologicalProcessCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the GO controlled vocabulary of biological processes.
Super-classes	Term^c

GO cellular component^c # Classes

URI	`http://nextprot.org/rdf#GoCellularComponent`
Is Defined By	http://nextprot.org/rdf
Description	Location in the cell of the mature protein using the Gene Ontology cellular component vocabulary.
Super-classes	Cellular component^c
In range of	go cellular component^op

GO cellular component term^c # Classes

URI	`http://nextprot.org/rdf#GoCellularComponentCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the GO controlled vocabulary of cellular components.
Super-classes	Term^c

GO molecular function^c # Classes

URI	`http://nextprot.org/rdf#GoMolecularFunction`
Is Defined By	http://nextprot.org/rdf
Description	Activity of the protein at the molecular level.
Super-classes	Function^c
In range of	go molecular function^op

GO molecular function term^c # Classes

URI	`http://nextprot.org/rdf#GoMolecularFunctionCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the GO controlled vocabulary of molecular functions.
Super-classes	Term^c

GO qualifier^c # Classes

URI	`http://nextprot.org/rdf#GoQualifier`
Is Defined By	http://nextprot.org/rdf
Description	GO qualifier
In range of	go qualifier^dp
Members	Located_in Contributes_to Part_of Is_active_in Enables Colocalizes_with

Helix^c # Classes

URI	`http://nextprot.org/rdf#Helix`
Is Defined By	http://nextprot.org/rdf
Description	Helical region within the protein structure.
Super-classes	Secondary structure^c
In range of	helix^op

Protein record history^c # Classes

URI	`http://nextprot.org/rdf#History`
Is Defined By	http://nextprot.org/rdf
Description	History of the entry.
Sub-classes	UniProt history^c neXtProt history^c
In domain of	version^dp updated^dp integrated^dp
In range of	history^op

Identifier^c # Classes

URI	`http://nextprot.org/rdf#Identifier`
Is Defined By	http://nextprot.org/rdf
Description	Identifier

Induction^c # Classes

URI	`http://nextprot.org/rdf#Induction`
Is Defined By	http://nextprot.org/rdf
Description	Effect of chemical compounds, environmental factors or transcriptional regulators on the expression of the protein.
Super-classes	General Annotation^c
In range of	induction^op

Initiator methionine^c # Classes

URI	`http://nextprot.org/rdf#InitiatorMethionine`
Is Defined By	http://nextprot.org/rdf
Description	Initiator methionine cleaved during protein processing.
Super-classes	Processing product.^c
In range of	initiator methionine^op

Interacting region^c # Classes

URI	`http://nextprot.org/rdf#InteractingRegion`
Is Defined By	http://nextprot.org/rdf
Description	Smallest region within the protein experimentally shown to participate in a given binary protein interaction.
Super-classes	Region^c
In range of	interacting region^op

Interaction^c # Classes

URI	`http://nextprot.org/rdf#Interaction`
Is Defined By	http://nextprot.org/rdf
Description	Interaction(s) of the protein with other proteins or molecules.
Super-classes	General Annotation^c
Sub-classes	Small molecule interaction^c Cofactor^c Cofactor information^c Binary interaction^c Activity regulation^c Interaction information^c
In range of	interaction^op

Interaction information^c # Classes

URI	`http://nextprot.org/rdf#InteractionInfo`
Is Defined By	http://nextprot.org/rdf
Description	Information on the protein quaternary structure and interaction(s) with other proteins or protein complexes.
Super-classes	Interaction^c
In range of	interaction information^op

Interaction mapping^c # Classes

URI	`http://nextprot.org/rdf#InteractionMapping`
Is Defined By	http://nextprot.org/rdf
Description	Region within the protein shown experimentally to participate in a given binary protein interaction.
Super-classes	Mapping^c
In range of	interaction mapping^op

International Non proprietary Name^c # Classes

URI	`http://nextprot.org/rdf#InternationalNonproprietaryName`
Is Defined By	http://nextprot.org/rdf
Description	International non-proprietary name (INN) of a protein.
Super-classes	Name^c

Intramembrane region^c # Classes

URI	`http://nextprot.org/rdf#IntramembraneRegion`
Is Defined By	http://nextprot.org/rdf
Description	Region within the protein interacting with the membrane lipid bilayer.
Super-classes	Topology^c
In range of	intramembrane region^op

Isoform^c # Classes

URI	`http://nextprot.org/rdf#Isoform`
Is Defined By	http://nextprot.org/rdf
Description	Protein product generated by alternative splicing, alternative promoter usage, and alternative translation initiation. Protein isoforms have different sequences.
Sub-classes	Proteoform^c
In domain of	miscellaneous region^op kinetic km^op peptide mapping^op dna-binding region^op calcium-binding region^op repeat^op zinc finger region^op topological domain^op protein sequence^op cofactor^op mapping^op caution^op sequence conflict^op pathway^op mutagenesis^op beta strand^op domain information^op go biological process^op active site^op induction^op glycosylation site^op uniprot keyword^op compositionally biased region^op swissprot displayed^dp interaction^op selenocysteine^op expression profile^op disulfide bond^op pH dependence^op subcellular location^op interaction information^op short sequence motif^op transport activity^op temperature dependence^op medium expression^op binary interaction^op go molecular function^op coiled-coil region^op activity regulation^op secondary structure^op redox potential^op general annotation^op miscellaneous^op initiator methionine^op region^op cross-link^op allergen^op go cellular component^op topology^op cleavage site^op nucleotide phosphate-binding region^op expression information^op metal binding site^op mature protein^op variant information^op expression^op srm peptide mapping^op pdb mapping^op non-consecutive residue^op peroxisome transit peptide^op transmembrane region^op turn^op binding site^op miscellaneous site^op low expression^op detected expression^op kinetic note^op non-terminal residue^op catalytic activity^op site^op undetected expression^op lipid moiety-binding region^op sequence caution^op proteoform^op cofactor information^op small molecule interaction^op interaction mapping^op ptm information^op modified residue^op function information^op absorption note^op high expression^op processing product^op developmental stage expression information^op cellular component^op domain^op signal peptide^op helix^op medical^op pharmaceutical^op interacting region^op mitochondrial transit peptide^op positional annotation^op enzyme classification^op variant^op intramembrane region^op absorption max^op function^op antibody mapping^op maturation peptide^op subcellular location information^op kinetic vmax^op ptm^op biophysicochemical property^op
In range of	isoform^op

Protein isoform name^c # Classes

URI	`http://nextprot.org/rdf#IsoformName`
Is Defined By	http://nextprot.org/rdf
Description	Protein isoform name.
Super-classes	Name^c

Kinetic KM^c # Classes

URI	`http://nextprot.org/rdf#KineticKM`
Is Defined By	http://nextprot.org/rdf
Description	Michaelis constant (KM). This is the substrate concentration at which the reaction rate is half of its maximal value.
Super-classes	Biophysicochemical property^c
In range of	kinetic km^op

Kinetic note^c # Classes

URI	`http://nextprot.org/rdf#KineticNote`
Is Defined By	http://nextprot.org/rdf
Description	Note with additional information on the kinetic data for the protein.
Super-classes	Biophysicochemical property^c
In range of	kinetic note^op

Kinetic Vmax^c # Classes

URI	`http://nextprot.org/rdf#KineticVmax`
Is Defined By	http://nextprot.org/rdf
Description	Maximal velocity (Vmax). Vmax is the reaction rate attained when the enzyme sites are saturated with substrate.
Super-classes	Biophysicochemical property^c
In range of	kinetic vmax^op

Large scale publication^c # Classes

URI	`http://nextprot.org/rdf#LargeScalePublication`
Is Defined By	http://nextprot.org/rdf
Description	Publication relevant to 15 or more protein entries.
Super-classes	Publication^c

Lipid moiety-binding region^c # Classes

URI	`http://nextprot.org/rdf#LipidationSite`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid(s) covalently attached to a lipid group.
Super-classes	PTM^c
In range of	lipid moiety-binding region^op

Mammalian phenotype^c # Classes

URI	`http://nextprot.org/rdf#MammalianPhenotype`
Is Defined By	http://nextprot.org/rdf
Description	Phenotype observed in a cell, tissue or organism.
Super-classes	General Annotation^c

Mammalian phenotype term^c # Classes

URI	`http://nextprot.org/rdf#MammalianPhenotypeCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the MGI controlled vocabulary of mammalian phenotypes.
Super-classes	Term^c

Mapping^c # Classes

URI	`http://nextprot.org/rdf#Mapping`
Is Defined By	http://nextprot.org/rdf
Description	Mapping of sequences (PrEST, peptide, etc.) to the protein isoform sequence.
Super-classes	Positional annotation^c
Sub-classes	PDB mapping^c Interaction mapping^c Peptide mapping^c Antibody mapping^c SRM peptide mapping^c
In range of	mapping^op

Mature protein^c # Classes

URI	`http://nextprot.org/rdf#MatureProtein`
Is Defined By	http://nextprot.org/rdf
Description	Mature form of the protein. Processing (signal peptide and propeptide cleavage, transit peptide cleavage or initiator methionine cleavage) is required for maturation.
Super-classes	Processing product.^c
In range of	mature protein^op

Medical^c # Classes

URI	`http://nextprot.org/rdf#Medical`
Is Defined By	http://nextprot.org/rdf
Description	Medically-relevant information on the protein.
Super-classes	General Annotation^c
Sub-classes	Allergen^c Disease^c Pharmaceutical^c
In range of	medical^op

MeSH anatomy term^c # Classes

URI	`http://nextprot.org/rdf#MeshAnatomyCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the NLM controlled vocabulary of medical subject headings (MeSH), A part (anatomy).
Super-classes	Term^c

MeSH term^c # Classes

URI	`http://nextprot.org/rdf#MeshCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the NLM controlled vocabulary of medical subject headings (MeSH).
Super-classes	Term^c

Metal binding site^c # Classes

URI	`http://nextprot.org/rdf#MetalBindingSite`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid directly involved in binding a metal ion.
Super-classes	Site^c
In range of	metal binding site^op

Miscellaneous^c # Classes

URI	`http://nextprot.org/rdf#Miscellaneous`
Is Defined By	http://nextprot.org/rdf
Description	Information on the protein that doesn't fall into the scope of any other section.
Super-classes	General Annotation^c
In range of	miscellaneous^op

Miscellaneous region^c # Classes

URI	`http://nextprot.org/rdf#MiscellaneousRegion`
Is Defined By	http://nextprot.org/rdf
Description	Region of interest within the protein.
Super-classes	Region^c
In range of	miscellaneous region^op

Miscellaneous site^c # Classes

URI	`http://nextprot.org/rdf#MiscellaneousSite`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid of interest within the protein.
Super-classes	Site^c
In range of	miscellaneous site^op

Mitochondrial transit peptide^c # Classes

URI	`http://nextprot.org/rdf#MitochondrialTransitPeptide`
Is Defined By	http://nextprot.org/rdf
Description	Transit peptide responsible for the transport of the protein to mitochondria.
Super-classes	Processing product.^c
In range of	mitochondrial transit peptide^op

Modified residue^c # Classes

URI	`http://nextprot.org/rdf#ModifiedResidue`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid modified post-translationally (excluding lipids, glycans and protein cross-links).
Super-classes	PTM^c
In range of	modified residue^op

Mutagenesis^c # Classes

URI	`http://nextprot.org/rdf#Mutagenesis`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid which has been experimentally altered by mutagenesis.
Super-classes	Positional annotation^c
In range of	mutagenesis^op

Name^c # Classes

URI	`http://nextprot.org/rdf#Name`
Is Defined By	http://nextprot.org/rdf
Description	Name.
Sub-classes	Gene name^c Cleaved region name^c Family name^c ORF name^c Short name^c Enzyme classification name^c CD Antigen name^c International Non proprietary Name^c Functional region name^c Protein name^c Protein isoform name^c Allergen name^c
In domain of	other name^op
In range of	recommended name^op other name^op alternative name^op

NCI Metathesaurus term^c # Classes

URI	`http://nextprot.org/rdf#NciMetathesaurusCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the NCI Metathesaurus controlled vocabulary.
Super-classes	Term^c

NCI thesaurus term^c # Classes

URI	`http://nextprot.org/rdf#NciThesaurusCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the NCI Thesaurus controlled vocabulary.
Super-classes	Term^c

neXtProt human anatomy term^c # Classes

URI	`http://nextprot.org/rdf#NextprotAnatomyCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the neXtProt controlled vocabulary of human anatomy and cell types.
Super-classes	Term^c
In range of	tissue^op

Cellosaurus term^c # Classes

URI	`http://nextprot.org/rdf#NextprotCellosaurusCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the Cellosaurus controlled vocabulary of cell lines.
Super-classes	Term^c
In range of	cell line^op

neXtProt domain term^c # Classes

URI	`http://nextprot.org/rdf#NextprotDomainCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the neXtProt controlled vocabulary of domains, repeat and zinc fingers in human proteins (derived from UniProt).
Super-classes	Term^c

neXtProt family term^c # Classes

URI	`http://nextprot.org/rdf#NextprotFamilyCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the neXtProt list of human protein families (derived from UniProt).
Super-classes	Term^c

neXtProt history^c # Classes

URI	`http://nextprot.org/rdf#NextprotHistory`
Is Defined By	http://nextprot.org/rdf
Description	neXtProt entry history
Super-classes	Protein record history^c

Ion channel electrophysiology term^c # Classes

URI	`http://nextprot.org/rdf#NextprotIcepoCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the neXtProt controlled vocabulary of ion channel electrophysiology (ICEPO).
Super-classes	Term^c

neXtProt metal term^c # Classes

URI	`http://nextprot.org/rdf#NextprotMetalCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the neXtProt controlled vocabulary of metal bound to human proteins (derived from UniProt).
Super-classes	Term^c

neXtProt modification effect term^c # Classes

URI	`http://nextprot.org/rdf#NextprotModificationEffectCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the neXtProt controlled vocabulary describing changes resulting from a modification on a protein. Possible modifications include variations and post-translational modifications, while changes can be for example a sub-cellular localization, a phenotype, or a protein property.
Super-classes	Term^c

neXtProt protein property term^c # Classes

URI	`http://nextprot.org/rdf#NextprotProteinPropertyCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the neXtProt controlled vocabulary of protein properties.
Super-classes	Term^c

neXtProt topology term^c # Classes

URI	`http://nextprot.org/rdf#NextprotTopologyCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the neXtProt controlled vocabulary describing the topology of transmembrane protein regions that span membrane compartments (derived from UniProt).
Super-classes	Term^c

Non-consecutive residue^c # Classes

URI	`http://nextprot.org/rdf#NonConsecutiveResidue`
Is Defined By	http://nextprot.org/rdf
Description	Two amino acids which are not consecutive and with a undetermined number of unsequenced residues between them.
Super-classes	Positional annotation^c
In range of	non-consecutive residue^op

Non-standard amino acid term^c # Classes

URI	`http://nextprot.org/rdf#NonStandardAminoAcidCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the controlled vocabulary of non-standard amino acids in protein sequences.
Super-classes	Term^c

Non-terminal residue^c # Classes

URI	`http://nextprot.org/rdf#NonTerminalResidue`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid which is not the terminal residue of the complete protein sequence. The sequence is incomplete.
Super-classes	Positional annotation^c
In range of	non-terminal residue^op

Nucleotide phosphate-binding region^c # Classes

URI	`http://nextprot.org/rdf#NucleotidePhosphateBindingRegion`
Is Defined By	http://nextprot.org/rdf
Description	Region binding nucleotide phosphates.
Super-classes	Region^c
In range of	nucleotide phosphate-binding region^op

ORF name^c # Classes

URI	`http://nextprot.org/rdf#ORFName`
Is Defined By	http://nextprot.org/rdf
Description	Open reading frame (ORF) name of the gene encoding the protein isoform(s).
Super-classes	Name^c
In range of	orf name^op

Observed expression^c # Classes

URI	`http://nextprot.org/rdf#ObservedExpression`
Is Defined By	http://nextprot.org/rdf
Description	Observed expression (:Positive :High :Medium :Low :Negative) of the gene product(s).
In range of	observed expression^op
Members	Positive High Negative Low Medium

MIM term^c # Classes

URI	`http://nextprot.org/rdf#OmimCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the OMIM controlled vocabulary of human genes and genetic phenotypes.
Super-classes	Term^c

Organelle term^c # Classes

URI	`http://nextprot.org/rdf#OrganelleCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the controlled vocabulary of organelles to which transit peptides can transport proteins.
Super-classes	Term^c

Pathway^c # Classes

URI	`http://nextprot.org/rdf#Pathway`
Is Defined By	http://nextprot.org/rdf
Description	Series of actions involving the protein and other molecules in a cell that leads to a certain product or a change in the cell.
Super-classes	Function^c
In range of	pathway^op

PDB mapping^c # Classes

URI	`http://nextprot.org/rdf#PdbMapping`
Is Defined By	http://nextprot.org/rdf
Description	Region of the protein for which there is a 3D structure in PDB.
Super-classes	Mapping^c
In domain of	method^dp
In range of	pdb mapping^op

Peptide mapping^c # Classes

URI	`http://nextprot.org/rdf#PeptideMapping`
Is Defined By	http://nextprot.org/rdf
Description	Peptide detected in a biological sample using mass spectrometry (MS).
Super-classes	Mapping^c
In domain of	peptide source^dp
In range of	peptide mapping^op

Peroxisome transit peptide^c # Classes

URI	`http://nextprot.org/rdf#PeroxisomeTransitPeptide`
Is Defined By	http://nextprot.org/rdf
Description	Transit peptide responsible for the transport of the protein to peroxisomes.
Super-classes	Processing product.^c
In range of	peroxisome transit peptide^op

Person^c # Classes

URI	`http://nextprot.org/rdf#Person`
Is Defined By	http://nextprot.org/rdf
Description	Person.
In domain of	suffix^dp
In range of	editor^op

PH dependence^c # Classes

URI	`http://nextprot.org/rdf#PhDependence`
Is Defined By	http://nextprot.org/rdf
Description	Optimum pH for protein activity, the variation of activity with pH variation and the pH stability of the protein.
Super-classes	Biophysicochemical property^c
In range of	pH dependence^op

Pharmaceutical^c # Classes

URI	`http://nextprot.org/rdf#Pharmaceutical`
Is Defined By	http://nextprot.org/rdf
Description	Use of the protein as a pharmaceutical drug.
Super-classes	Medical^c
In range of	pharmaceutical^op

Phenotype variation^c # Classes

URI	`http://nextprot.org/rdf#PhenotypicVariation`
Is Defined By	http://nextprot.org/rdf
Description	Variation in observed molecular or organism phenotype due to modifications to the protein.
Super-classes	General Annotation^c
In range of	phenotype variation^op

Positional annotation^c # Classes

URI	`http://nextprot.org/rdf#PositionalAnnotation`
Is Defined By	http://nextprot.org/rdf
Description	Annotation relevant to one or more amino acid(s) of the protein.
Super-classes	Annotation^c
Sub-classes	Mutagenesis^c Processing product.^c Region^c Mapping^c Non-terminal residue^c Sequence conflict^c Variant^c Disease-related variant^c Non-consecutive residue^c PTM^c Secondary structure^c Topology^c Site^c
In domain of	start^dp
In range of	positional annotation^op

Processing product.^c # Classes

URI	`http://nextprot.org/rdf#ProcessingProduct`
Is Defined By	http://nextprot.org/rdf
Description	Part of the protein resulting from natural processing events.
Super-classes	Positional annotation^c
Sub-classes	Signal peptide^c Mitochondrial transit peptide^c Initiator methionine^c Mature protein^c Maturation peptide^c Peroxisome transit peptide^c
In range of	processing product^op

Maturation peptide^c # Classes

URI	`http://nextprot.org/rdf#Propeptide`
Is Defined By	http://nextprot.org/rdf
Description	Part of the protein that is cleaved during maturation or activation. A propeptide generally has no independent biological function.
Super-classes	Processing product.^c
In range of	maturation peptide^op

Protein existence^c # Classes

URI	`http://nextprot.org/rdf#ProteinExistence`
Is Defined By	http://nextprot.org/rdf
Description	Type of evidence that supports the existence of the protein.
In domain of	protein existence level^dp
In range of	existence^op
Members	Predicted Evidence_at_transcript_level Evidence_at_protein_level Inferred_from_homology Uncertain

Protein name^c # Classes

URI	`http://nextprot.org/rdf#ProteinName`
Is Defined By	http://nextprot.org/rdf
Description	Protein name.
Super-classes	Name^c

Protein property^c # Classes

URI	`http://nextprot.org/rdf#ProteinProperty`
Is Defined By	http://nextprot.org/rdf
Description	A property of the protein, such as stability.
Super-classes	General Annotation^c

Protein sequence^c # Classes

URI	`http://nextprot.org/rdf#ProteinSequence`
Is Defined By	http://nextprot.org/rdf
Description	Amino acid sequence of the protein isoform and its associated properties (length, molecular weight and isoelectric point)
In domain of	molecular weight^dp isoelectric point^dp chain^dp
In range of	protein sequence^op

Proteoform^c # Classes

URI	`http://nextprot.org/rdf#Proteoform`
Is Defined By	http://nextprot.org/rdf
Description	Protein isoform which include modifications, such as variant(s) and PTM(s).
Super-classes	Isoform^c
In domain of	phenotype variation^op difference^op disease-related variant^op
In range of	proteoform^op

PSI-MI Molecular Interaction term^c # Classes

URI	`http://nextprot.org/rdf#PsiMiCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the PSI-MI controlled vocabulary of molecular interactions.
Super-classes	Term^c
In range of	interaction detection method^dp

PTM^c # Classes

URI	`http://nextprot.org/rdf#Ptm`
Is Defined By	http://nextprot.org/rdf
Description	Post-translational modification(s) of the protein.
Super-classes	Positional annotation^c
Sub-classes	Selenocysteine^c Cross-link^c Disulfide bond^c Lipid moiety-binding region^c Modified residue^c Glycosylation site^c
In range of	ptm^op

PTM information^c # Classes

URI	`http://nextprot.org/rdf#PtmInfo`
Is Defined By	http://nextprot.org/rdf
Description	Information on the post-translational modifications (PTMs) of the protein.
Super-classes	General Annotation^c
In range of	ptm information^op

Publication^c # Classes

URI	`http://nextprot.org/rdf#Publication`
Is Defined By	http://nextprot.org/rdf
Description	Publication in the scientific literature.
Sub-classes	Large scale publication^c
In domain of	editor^op from^dp issue^dp last page^dp publication type^dp volume^dp city^dp journal^dp title^dp publisher^dp year^dp first page^dp author^op
In range of	metadata^dp

Quality qualifier^c # Classes

URI	`http://nextprot.org/rdf#QualityQualifier`
Is Defined By	http://nextprot.org/rdf
Description	Quality qualifier describing the reliability of an annotation or evidence.
In range of	quality^op
Members	BRONZE GOLD SILVER

Redox potential^c # Classes

URI	`http://nextprot.org/rdf#RedoxPotential`
Is Defined By	http://nextprot.org/rdf
Description	Value of the standard (midpoint) oxido-reduction potential(s) for the electron transport protein.
Super-classes	Biophysicochemical property^c
In range of	redox potential^op

Region^c # Classes

URI	`http://nextprot.org/rdf#Region`
Is Defined By	http://nextprot.org/rdf
Description	Region of the protein isoform.
Super-classes	Positional annotation^c
Sub-classes	Miscellaneous region^c Coiled-coil region^c Calcium-binding region^c DNA-binding region^c Repeat^c Domain^c Zinc finger region^c Nucleotide phosphate-binding region^c Interacting region^c Compositionally biased region^c Short sequence motif^c
In range of	region^op

Repeat^c # Classes

URI	`http://nextprot.org/rdf#Repeat`
Is Defined By	http://nextprot.org/rdf
Description	Repeated sequence motifs or domains within the protein isoform.
Super-classes	Region^c
In range of	repeat^op

Secondary structure^c # Classes

URI	`http://nextprot.org/rdf#SecondaryStructure`
Is Defined By	http://nextprot.org/rdf
Description	Secondary structure (helix, turn, beta strand) within the protein.
Super-classes	Positional annotation^c
Sub-classes	Beta strand^c Turn^c Helix^c
In range of	secondary structure^op

Selenocysteine^c # Classes

URI	`http://nextprot.org/rdf#Selenocysteine`
Is Defined By	http://nextprot.org/rdf
Description	Selenocysteine present in the sequence of the protein.
Super-classes	PTM^c
In range of	selenocysteine^op

Sequence caution^c # Classes

URI	`http://nextprot.org/rdf#SequenceCaution`
Is Defined By	http://nextprot.org/rdf
Description	Information on difference(s) between the protein isoform sequence(s) shown and other available protein sequences derived from the same gene.
Super-classes	General Annotation^c
In range of	sequence caution^op

Sequence conflict^c # Classes

URI	`http://nextprot.org/rdf#SequenceConflict`
Is Defined By	http://nextprot.org/rdf
Description	Single amino acid difference between the sequence shown and another submitted sequence that cannot be explained by a known polymorphism.
Super-classes	Positional annotation^c
In range of	sequence conflict^op

Severity^c # Classes

URI	`http://nextprot.org/rdf#Severity`
Is Defined By	http://nextprot.org/rdf
Description	Level of severity of a phenotype variation
In range of	severity^dp
Members	Severe Mild Moderate

Short name^c # Classes

URI	`http://nextprot.org/rdf#ShortName`
Is Defined By	http://nextprot.org/rdf
Description	Shorter version of a name.
Super-classes	Name^c

Short sequence motif^c # Classes

URI	`http://nextprot.org/rdf#ShortSequenceMotif`
Is Defined By	http://nextprot.org/rdf
Description	Short sequence motif (up to 20 amino acids) of biological interest in the protein.
Super-classes	Region^c
In range of	short sequence motif^op

Signal peptide^c # Classes

URI	`http://nextprot.org/rdf#SignalPeptide`
Is Defined By	http://nextprot.org/rdf
Description	N-terminal sequence targeting the protein to the secretory pathway.
Super-classes	Processing product.^c
In range of	signal peptide^op

Site^c # Classes

URI	`http://nextprot.org/rdf#Site`
Is Defined By	http://nextprot.org/rdf
Description	Specific amino acid confering a property to the protein.
Super-classes	Positional annotation^c
Sub-classes	Binding site^c Cleavage site^c Miscellaneous site^c Metal binding site^c Active site^c
In range of	site^op

Small molecule interaction^c # Classes

URI	`http://nextprot.org/rdf#SmallMoleculeInteraction`
Is Defined By	http://nextprot.org/rdf
Description	Interaction of the protein with chemical molecule(s).
Super-classes	Interaction^c
In range of	small molecule interaction^op

Source^c # Classes

URI	`http://nextprot.org/rdf#Source`
Is Defined By	http://nextprot.org/rdf
Description	Original source of the data.
In range of	peptide source^dp assigned by^fp
Members	http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Other_Anatomical_Entities http://nextprot.org/rdf/source/Alzheimers_University_of_Toronto http://nextprot.org/rdf/source/MassIVE_human_Other_Male_Reproductive_Organ http://nextprot.org/rdf/source/PMID_20140087 http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Brain http://nextprot.org/rdf/source/GlyConnect http://nextprot.org/rdf/source/PMID_21890473 http://nextprot.org/rdf/source/YuBioLab http://nextprot.org/rdf/source/FlyBase http://nextprot.org/rdf/source/MassIVE_human_Sperm http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Urinary_Bladder http://nextprot.org/rdf/source/PeptideAtlas_human_Skin http://nextprot.org/rdf/source/MassIVE_human_Oocyte http://nextprot.org/rdf/source/MassIVE_human_Pituitary_Gland http://nextprot.org/rdf/source/Orphanet http://nextprot.org/rdf/source/PMID_23955771 http://nextprot.org/rdf/source/Dyp http://nextprot.org/rdf/source/RHEA http://nextprot.org/rdf/source/ENYO http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Pancreas http://nextprot.org/rdf/source/TCDB http://nextprot.org/rdf/source/GFP-cDNAEMBL http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Digestive_System http://nextprot.org/rdf/source/PMID_20687582 http://nextprot.org/rdf/source/KEGG_PTW http://nextprot.org/rdf/source/MassIVE_human_Urine http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Ovary http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Other_Anatomical_Entities http://nextprot.org/rdf/source/MassIVE_human_Breast http://nextprot.org/rdf/source/PeptideAtlas_human_Thyroid_Gland http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Colon http://nextprot.org/rdf/source/MDATA_0033_2013 http://nextprot.org/rdf/source/dbSNP http://nextprot.org/rdf/source/MassIVE_human_Placenta http://nextprot.org/rdf/source/MassIVE_human_Brain http://nextprot.org/rdf/source/MassIVE_human_Testis http://nextprot.org/rdf/source/WB http://nextprot.org/rdf/source/AgBase http://nextprot.org/rdf/source/PeptideAtlas_human_Placenta http://nextprot.org/rdf/source/MassIVE_human_Lung http://nextprot.org/rdf/source/DFLAT http://nextprot.org/rdf/source/MassIVE_human_Skin http://nextprot.org/rdf/source/PMID_24129315 http://nextprot.org/rdf/source/PMID_23266961 http://nextprot.org/rdf/source/MassIVE_human_Cancer_Ovary http://nextprot.org/rdf/source/PeptideAtlas_human_Adrenal_Gland http://nextprot.org/rdf/source/PMID_22148984 http://nextprot.org/rdf/source/MassIVE_human_Cancer_Liver http://nextprot.org/rdf/source/BHF-UCL http://nextprot.org/rdf/source/CACAO http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Skin http://nextprot.org/rdf/source/SYSCILIA_CCNET http://nextprot.org/rdf/source/GDB http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Kidney http://nextprot.org/rdf/source/IntAct http://nextprot.org/rdf/source/PeptideAtlas_human_Kidney http://nextprot.org/rdf/source/MassIVE_human_Cancer_Bone http://nextprot.org/rdf/source/PMID_23236377 http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Other_Anatomical_Entities http://nextprot.org/rdf/source/PeptideAtlas_human_Eye http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Lung http://nextprot.org/rdf/source/PeptideAtlas_human_Pancreas http://nextprot.org/rdf/source/ParkinsonsUK-UCL http://nextprot.org/rdf/source/HGNC-UCL http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Other_Male_Reproductive_Organ http://nextprot.org/rdf/source/PeptideAtlas_human_Blood_Plasma http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Urinary_Bladder http://nextprot.org/rdf/source/PeptideAtlas_human_Liver http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_and_Non_Cancer_Cell_Lines http://nextprot.org/rdf/source/PeptideAtlas_human_phosphoproteome http://nextprot.org/rdf/source/MassIVE_human_Urinary_Bladder http://nextprot.org/rdf/source/CAFA http://nextprot.org/rdf/source/GOC http://nextprot.org/rdf/source/PMID_20570859 http://nextprot.org/rdf/source/MassIVE_human_Other_Female_Reproductive_Organ http://nextprot.org/rdf/source/MTBbase http://nextprot.org/rdf/source/PeptideAtlas_human_Brain http://nextprot.org/rdf/source/PeptideAtlas_human_Sperm http://nextprot.org/rdf/source/MassIVE_human_Heart http://nextprot.org/rdf/source/SGD http://nextprot.org/rdf/source/PeptideAtlas_human_Other_Female_Reproductive_Organ http://nextprot.org/rdf/source/MassIVE_human_Cancer_Kidney http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Lung http://nextprot.org/rdf/source/PMID_21139048 http://nextprot.org/rdf/source/MassIVE_human_Blood_Cells http://nextprot.org/rdf/source/MassIVE_human_Bone http://nextprot.org/rdf/source/PMID_25038526 http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Other_Gestational_Structure http://nextprot.org/rdf/source/PeptideAtlas_human_Heart http://nextprot.org/rdf/source/PeptideAtlas_human_Ovary http://nextprot.org/rdf/source/Ensembl http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Liver http://nextprot.org/rdf/source/MassIVE_human_Ovary http://nextprot.org/rdf/source/PeptideAtlas_human_Other_Anatomical_Entities http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Ovary http://nextprot.org/rdf/source/MassIVE_human_Liver http://nextprot.org/rdf/source/MassIVE_human_Other_Respiratory_Organ http://nextprot.org/rdf/source/ComplexPortal http://nextprot.org/rdf/source/MassIVE_human_Non_Cancer_Cell_Lines http://nextprot.org/rdf/source/PeptideAtlas_human_Oocyte http://nextprot.org/rdf/source/Reactome http://nextprot.org/rdf/source/MassIVE_human_Cancer_Digestive_System http://nextprot.org/rdf/source/Uniprot http://nextprot.org/rdf/source/PMID_25218447 http://nextprot.org/rdf/source/MGI http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Bone http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Other_Female_Reproductive_Organ http://nextprot.org/rdf/source/GO_central http://nextprot.org/rdf/source/PeptideAtlas http://nextprot.org/rdf/source/MassIVE_human_Kidney http://nextprot.org/rdf/source/PeptideAtlas_human_Ureter http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Lung http://nextprot.org/rdf/source/InterPro http://nextprot.org/rdf/source/PeptideAtlas_human_Digestive_System http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Other_Female_Reproductive_Organ http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Pancreas http://nextprot.org/rdf/source/PMID_20972266 http://nextprot.org/rdf/source/Human_protein_atlas http://nextprot.org/rdf/source/MassIVE_human_Cancer_Brain http://nextprot.org/rdf/source/PINC http://nextprot.org/rdf/source/MDATA_0004_2011 http://nextprot.org/rdf/source/PeptideAtlas_human_Spleen http://nextprot.org/rdf/source/SRMAtlas http://nextprot.org/rdf/source/PeptideAtlas_human_Urinary_Bladder http://nextprot.org/rdf/source/DrugBank http://nextprot.org/rdf/source/PeptideAtlas_human_Blood_Cells http://nextprot.org/rdf/source/MassIVE_human_Other_Gestational_Structure http://nextprot.org/rdf/source/dictyBase http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Other_Male_Reproductive_Organ http://nextprot.org/rdf/source/MassIVE_human_Cancer_Skin http://nextprot.org/rdf/source/PeptideAtlas_human_Lung http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Digestive_System http://nextprot.org/rdf/source/ARUK-UCL http://nextprot.org/rdf/source/MassIVE_human_Ureter http://nextprot.org/rdf/source/SynGO http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Blood http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Liver http://nextprot.org/rdf/source/MassIVE_human_Digestive_System http://nextprot.org/rdf/source/MassIVE_human_Muscle http://nextprot.org/rdf/source/MDATA_0023_2012 http://nextprot.org/rdf/source/PMID_20797634 http://nextprot.org/rdf/source/PeptideAtlas_human_Testis http://nextprot.org/rdf/source/MassIVE_human_Eye http://nextprot.org/rdf/source/MassIVE_human_Cancer_Blood_Cells http://nextprot.org/rdf/source/MassIVE_human_Blood_Vessel http://nextprot.org/rdf/source/PeptideAtlas_human_Olfactory_System http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Adrenal_Gland http://nextprot.org/rdf/source/PeptideAtlas_human_Other_Male_Reproductive_Organ http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Ovary http://nextprot.org/rdf/source/PeptideAtlas_human_Pituitary_Gland http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Blood http://nextprot.org/rdf/source/PeptideAtlas_human_Breast http://nextprot.org/rdf/source/MassIVE_human_Spleen http://nextprot.org/rdf/source/MassIVE_human_Thyroid_Gland http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Kidney http://nextprot.org/rdf/source/PMID_22865923 http://nextprot.org/rdf/source/PeptideAtlas_human_Cerebrospinal_Fluid http://nextprot.org/rdf/source/Cellosaurus http://nextprot.org/rdf/source/MassIVE_human_Olfactory_System http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Digestive_System http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Skin http://nextprot.org/rdf/source/PMID_21645671 http://nextprot.org/rdf/source/Cosmic http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Liver http://nextprot.org/rdf/source/PMID_23584533 http://nextprot.org/rdf/source/MassIVE_human_Pancreas http://nextprot.org/rdf/source/HGNC http://nextprot.org/rdf/source/NextProt http://nextprot.org/rdf/source/PeptideAtlas_human_Other_Respiratory_Organ http://nextprot.org/rdf/source/Bgee http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Skin http://nextprot.org/rdf/source/PeptideAtlas_human_Muscle http://nextprot.org/rdf/source/PeptideAtlas_human_Other_Gestational_Structure http://nextprot.org/rdf/source/SynGO-UCL http://nextprot.org/rdf/source/MassIVE_human_Cancer_Other_Male_Reproductive_Organ http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Breast http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Breast http://nextprot.org/rdf/source/MassIVE http://nextprot.org/rdf/source/MassIVE_human_Other_Anatomical_Entities http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Bone http://nextprot.org/rdf/source/MassIVE_human_Blood_Plasma http://nextprot.org/rdf/source/LIFEdb http://nextprot.org/rdf/source/MassIVE_human_Cancer_Breast http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Brain http://nextprot.org/rdf/source/NTNU_SB http://nextprot.org/rdf/source/PeptideAtlas_human_Urine http://nextprot.org/rdf/source/MassIVE_human_Adrenal_Gland http://nextprot.org/rdf/source/PeptideAtlas_human_Non_Cancer_Cell_Lines http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Breast http://nextprot.org/rdf/source/gnomAD http://nextprot.org/rdf/source/MassIVE_human_Cancer_Urinary_Bladder http://nextprot.org/rdf/source/MassIVE_human_Cancer_Lung http://nextprot.org/rdf/source/MassIVE_human_Cerebrospinal_Fluid http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Other_Female_Reproductive_Organ http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Brain

SRM peptide mapping^c # Classes

URI	`http://nextprot.org/rdf#SrmPeptideMapping`
Is Defined By	http://nextprot.org/rdf
Description	Peptide that can be used to quantify the protein by selected reaction monitoring (SRM) .
Super-classes	Mapping^c
In range of	srm peptide mapping^op

Subcellular location^c # Classes

URI	`http://nextprot.org/rdf#SubcellularLocation`
Is Defined By	http://nextprot.org/rdf
Description	Location in the cell of the mature protein using the UniProt vocabulary.
Super-classes	Cellular component^c
In range of	subcellular location^op

Subcellular location information^c # Classes

URI	`http://nextprot.org/rdf#SubcellularLocationNote`
Is Defined By	http://nextprot.org/rdf
Description	Note with additional information on the location in the cell of the mature protein.
Super-classes	Cellular component^c
In range of	subcellular location information^op

Temperature dependence^c # Classes

URI	`http://nextprot.org/rdf#TemperatureDependence`
Is Defined By	http://nextprot.org/rdf
Description	Optimal temperature for enzyme activity and/or the variation of enzyme activity with temperature variation. The thermostability of the enzyme is mentioned, when known.
Super-classes	Biophysicochemical property^c
In range of	temperature dependence^op

Term^c # Classes

URI	`http://nextprot.org/rdf#Term`
Is Defined By	http://nextprot.org/rdf
Description	Term from any controlled vocabulary.
Sub-classes	Mammalian phenotype term^c NCI Metathesaurus term^c Enzyme classification number^c MeSH anatomy term^c neXtProt protein property term^c Organelle term^c MeSH term^c Ion channel electrophysiology term^c neXtProt topology term^c GO cellular component term^c UniProtKB post-translational modification term^c neXtProt family term^c GO biological process term^c GO molecular function term^c neXtProt modification effect term^c PSI-MI Molecular Interaction term^c neXtProt domain term^c Evidence code term^c Non-standard amino acid term^c UniProtKB disease term^c Bgee developmental stage term^c Cellosaurus term^c UniProtKB keyword^c NCI thesaurus term^c neXtProt human anatomy term^c UniProtKB subcellular topology term^c UniProtKB subcellular location term^c UniProtKB subcellular orientation term^c neXtProt metal term^c MIM term^c UniPathway term^c
In domain of	related child of
In range of	related child of term^op

Topological domain^c # Classes

URI	`http://nextprot.org/rdf#TopologicalDomain`
Is Defined By	http://nextprot.org/rdf
Description	Location of non-membrane regions within a membrane-spanning protein.
Super-classes	Topology^c
In range of	topological domain^op

Topology^c # Classes

URI	`http://nextprot.org/rdf#Topology`
Is Defined By	http://nextprot.org/rdf
Description	Description of how a transmembrane protein spans the membrane
Super-classes	Positional annotation^c
Sub-classes	Topological domain^c Intramembrane region^c Transmembrane region^c
In range of	topology^op

Transmembrane region^c # Classes

URI	`http://nextprot.org/rdf#TransmembraneRegion`
Is Defined By	http://nextprot.org/rdf
Description	Region of the protein which spans the membrane.
Super-classes	Topology^c
In range of	transmembrane region^op

Transport activity^c # Classes

URI	`http://nextprot.org/rdf#TransportActivity`
Is Defined By	http://nextprot.org/rdf
Description	Transport of substances by the protein isoform, usually across a membrane.
Super-classes	Function^c
In range of	transport activity^op

Turn^c # Classes

URI	`http://nextprot.org/rdf#Turn`
Is Defined By	http://nextprot.org/rdf
Description	Hydrogen-bonded turn within the protein sequence.
Super-classes	Secondary structure^c
In range of	turn^op

UniPathway term^c # Classes

URI	`http://nextprot.org/rdf#UnipathwayCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the UniProt controlled vocabulary of metabolic pathways.
Super-classes	Term^c

UniProtKB disease term^c # Classes

URI	`http://nextprot.org/rdf#UniprotDiseaseCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the UniProt controlled vocabulary of human diseases associated with genetic variations.
Super-classes	Term^c

UniProt history^c # Classes

URI	`http://nextprot.org/rdf#UniprotHistory`
Is Defined By	http://nextprot.org/rdf
Description	Uniprot entry history
Super-classes	Protein record history^c
In domain of	last sequence update^dp sequence version^dp

UniProtKB keyword annotation^c # Classes

URI	`http://nextprot.org/rdf#UniprotKeyword`
Is Defined By	http://nextprot.org/rdf
Description	UniProt keyword summarising the content of an entry.
Super-classes	General Annotation^c
In range of	uniprot keyword^op

UniProtKB keyword^c # Classes

URI	`http://nextprot.org/rdf#UniprotKeywordCv`
Is Defined By	http://nextprot.org/rdf
Description	UniProt keyword.
Super-classes	Term^c

UniProtKB post-translational modification term^c # Classes

URI	`http://nextprot.org/rdf#UniprotPtmCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the UniProt controlled vocabulary of post-translational modifications.
Super-classes	Term^c

UniProtKB subcellular location term^c # Classes

URI	`http://nextprot.org/rdf#UniprotSubcellularLocationCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the UniProt controlled vocabulary of subcellular locations.
Super-classes	Term^c

UniProtKB subcellular orientation term^c # Classes

URI	`http://nextprot.org/rdf#UniprotSubcellularOrientationCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the UniProt controlled vocabulary of subcellular locations describing a subcellular orientation.
Super-classes	Term^c

UniProtKB subcellular topology term^c # Classes

URI	`http://nextprot.org/rdf#UniprotSubcellularTopologyCv`
Is Defined By	http://nextprot.org/rdf
Description	Term from the UniProt controlled vocabulary of subcellular locations describing a subcellular topology.
Super-classes	Term^c

Variant^c # Classes

URI	`http://nextprot.org/rdf#Variant`
Is Defined By	http://nextprot.org/rdf
Description	Sequence variation observed in an individual which may or may not be linked to a disease.
Super-classes	Positional annotation^c
In range of	variant^op

Variant information^c # Classes

URI	`http://nextprot.org/rdf#VariantInfo`
Is Defined By	http://nextprot.org/rdf
Description	Information on polymorphic variant(s) of the protein isoform sequence.
Super-classes	General Annotation^c
In range of	variant information^op

Version^c # Classes

URI	`http://nextprot.org/rdf#Version`
Is Defined By	http://nextprot.org/rdf
Description	Version of the neXtProt API used to generate current data.

Cross reference^c # Classes

URI	`http://nextprot.org/rdf#Xref`
Is Defined By	http://nextprot.org/rdf
Description	Link to an external resource providing additional information.
In range of	from^dp

Zinc finger region^c # Classes

URI	`http://nextprot.org/rdf#ZincFingerRegion`
Is Defined By	http://nextprot.org/rdf
Description	Zinc finger region within the protein.
Super-classes	Region^c
In range of	zinc finger region^op

Object Properties ↑

absorption max
absorption note
active site
activity regulation
allergen
alternative name
antibody mapping
author
best gene mapping
beta strand
binary interaction
binding site
biophysicochemical property
calcium-binding region
catalytic activity
caution
cell line
cellular component
cleavage site
cofactor
cofactor information
coiled-coil region
compositionally biased region
cross-link
detected expression
developmental stage
developmental stage expression information
difference
disease
disease-related variant
disulfide bond
dna-binding region
domain
domain information
editor
enzyme classification
evidence
evidence code
existence
experimental context
expression
expression information
expression profile
family name
from database
function
function information
gene
general annotation
glycosylation site
go biological process
go cellular component
go molecular function
helix
high expression
history
impacted object
induction
initiator methionine
interactant
interacting region
interaction
interaction information
interaction mapping
intramembrane region
isoform
kinetic km
kinetic note
kinetic vmax
lipid moiety-binding region
low expression
mapping
mature protein
medical
medium expression
metal binding site
miscellaneous
miscellaneous region
miscellaneous site
mitochondrial transit peptide
modified residue
mutagenesis
name
negative evidence
non-consecutive residue
non-terminal residue
nucleotide phosphate-binding region
observed expression
orf name
other name
pathway
pdb mapping
peptide mapping
peroxisome transit peptide
pH dependence
pharmaceutical
phenotype variation
positional annotation
processing product
maturation peptide
proteoform
provenance
ptm
ptm information
quality
recommended name
redox potential
reference
region
repeat
secondary structure
selenocysteine
protein sequence
sequence caution
sequence conflict
short sequence motif
signal peptide
site
small molecule interaction
srm peptide mapping
subcellular location
subcellular location information
temperature dependence
term
tissue
topological domain
topology
transmembrane region
transport activity
turn
undetected expression
uniprot keyword
variant
variant information
zinc finger region

absorption max^op # OPs

URI	`http://nextprot.org/rdf#absorptionMax`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an absorption max annotation
Super-properties	biophysicochemical property^op
Domain(s)	Isoform^c
Range(s)	AbsorptionMax^c

absorption note^op # OPs

URI	`http://nextprot.org/rdf#absorptionNote`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an absorption note annotation
Super-properties	biophysicochemical property^op
Domain(s)	Isoform^c
Range(s)	AbsorptionNote^c

active site^op # OPs

URI	`http://nextprot.org/rdf#activeSite`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an active site annotation
Super-properties	site^op
Domain(s)	Isoform^c
Range(s)	ActiveSite^c

activity regulation^op # OPs

URI	`http://nextprot.org/rdf#activityRegulation`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an activity regulation annotation
Super-properties	interaction^op
Domain(s)	Isoform^c
Range(s)	ActivityRegulation^c

allergen^op # OPs

URI	`http://nextprot.org/rdf#allergen`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an allergen annotation
Super-properties	medical^op
Domain(s)	Isoform^c
Range(s)	Allergen^c

alternative name^op # OPs

URI	`http://nextprot.org/rdf#alternativeName`
Is Defined By	http://nextprot.org/rdf
Description	Links a protein, gene or isoform to an alternative name
Super-properties	name^op
Domain(s)	(Protein^c or Isoform^c or Gene^c)
Range(s)	Name^c

antibody mapping^op # OPs

URI	`http://nextprot.org/rdf#antibodyMapping`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an antibody mapping annotation
Super-properties	mapping^op
Domain(s)	Isoform^c
Range(s)	AntibodyMapping^c

author^op # OPs

URI	`http://nextprot.org/rdf#author`
Is Defined By	http://nextprot.org/rdf
Description	Links a publication to an author
Domain(s)	Publication^c
Range(s)	http://nextprot.org/rdf#Person http://nextprot.org/rdf#Consortium

best gene mapping^op # OPs

URI	`http://nextprot.org/rdf#bestGeneMapping`
Is Defined By	http://nextprot.org/rdf
Description	Links a gene to it being chosen as the representative gene for a multigenic entry
Domain(s)	Gene^c
Range(s)	Entry^c

beta strand^op # OPs

URI	`http://nextprot.org/rdf#betaStrand`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a beta strand annotation
Super-properties	secondary structure^op
Domain(s)	Isoform^c
Range(s)	BetaStrand^c

binary interaction^op # OPs

URI	`http://nextprot.org/rdf#binaryInteraction`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a binary interaction annotation
Super-properties	interaction^op
Domain(s)	Isoform^c
Range(s)	BinaryInteraction^c

binding site^op # OPs

URI	`http://nextprot.org/rdf#bindingSite`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a binding site annotation
Super-properties	site^op
Domain(s)	Isoform^c
Range(s)	BindingSite^c

biophysicochemical property^op # OPs

URI	`http://nextprot.org/rdf#biophysicochemicalProperty`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a biophysicochemical property annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	BiophysicochemicalProperty^c

calcium-binding region^op # OPs

URI	`http://nextprot.org/rdf#calciumBindingRegion`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a calcium-binding region annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	CalciumBindingRegion^c

catalytic activity^op # OPs

URI	`http://nextprot.org/rdf#catalyticActivity`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a catalytic activity annotation
Super-properties	function^op
Domain(s)	Isoform^c
Range(s)	CatalyticActivity^c

caution^op # OPs

URI	`http://nextprot.org/rdf#caution`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a caution annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	Caution^c

cell line^op # OPs

URI	`http://nextprot.org/rdf#cellLine`
Is Defined By	http://nextprot.org/rdf
Description	Links an experimental context to a cell line
Domain(s)	Experimental context^c
Range(s)	NextprotCellosaurusCv^c

cellular component^op # OPs

URI	`http://nextprot.org/rdf#cellularComponent`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a cellular component annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	CellularComponent^c

cleavage site^op # OPs

URI	`http://nextprot.org/rdf#cleavageSite`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a cleavage site annotation
Super-properties	site^op
Domain(s)	Isoform^c
Range(s)	CleavageSite^c

cofactor^op # OPs

URI	`http://nextprot.org/rdf#cofactor`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a cofactor annotation
Super-properties	interaction^op
Domain(s)	Isoform^c
Range(s)	Cofactor^c

cofactor information^op # OPs

URI	`http://nextprot.org/rdf#cofactorInfo`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a cofactor information annotation
Super-properties	interaction^op
Domain(s)	Isoform^c
Range(s)	CofactorInfo^c

coiled-coil region^op # OPs

URI	`http://nextprot.org/rdf#coiledCoilRegion`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a coiled-coil region annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	CoiledCoilRegion^c

compositionally biased region^op # OPs

URI	`http://nextprot.org/rdf#compositionallyBiasedRegion`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a compositionally biased region annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	CompositionallyBiasedRegion^c

cross-link^op # OPs

URI	`http://nextprot.org/rdf#crossLink`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a cross-link annotation
Super-properties	ptm^op
Domain(s)	Isoform^c
Range(s)	CrossLink^c

detected expression^op # OPs

URI	`http://nextprot.org/rdf#detectedExpression`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to at least one detectable level of expression
Super-properties	expression^op
Domain(s)	Isoform^c
Range(s)	ExpressionProfile^c

developmental stage^op # OPs

URI	`http://nextprot.org/rdf#developmentalStage`
Is Defined By	http://nextprot.org/rdf
Description	Links an experimental context to a developmental stage
Domain(s)	Experimental context^c
Range(s)	BgeeDevelopmentalStageCv^c

developmental stage expression information^op # OPs

URI	`http://nextprot.org/rdf#developmentalStageInfo`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a developmental stage information annotation
Super-properties	expression^op
Domain(s)	Isoform^c
Range(s)	DevelopmentalStageInfo^c

difference^op # OPs

URI	`http://nextprot.org/rdf#difference`
Is Defined By	http://nextprot.org/rdf
Description	Links a proteoform to a variant or mutagenesis annotation
Domain(s)	Proteoform^c
Range(s)	http://nextprot.org/rdf#Mutagenesis http://nextprot.org/rdf#Variant

disease^op # OPs

URI	`http://nextprot.org/rdf#disease`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a disease annotation or an experimental context to a disease term
Super-properties	medical^op
Domain(s)	(Experimental context^c or Isoform^c)
Range(s)	http://nextprot.org/rdf#NciMetathesaurusCv http://nextprot.org/rdf#NciThesaurusCv http://nextprot.org/rdf#Disease

disease-related variant^op # OPs

URI	`http://nextprot.org/rdf#diseaseRelatedVariant`
Is Defined By	http://nextprot.org/rdf
Description	Links an proteoform to a disease-related variant annotation
Super-properties	positional annotation^op
Domain(s)	Proteoform^c
Range(s)	DiseaseRelatedVariant^c

disulfide bond^op # OPs

URI	`http://nextprot.org/rdf#disulfideBond`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a disulfide bond annotation
Super-properties	ptm^op
Domain(s)	Isoform^c
Range(s)	DisulfideBond^c

dna-binding region^op # OPs

URI	`http://nextprot.org/rdf#dnaBindingRegion`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a DNA-binding region annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	DnaBindingRegion^c

domain^op # OPs

URI	`http://nextprot.org/rdf#domain`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a domain annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	Domain^c

domain information^op # OPs

URI	`http://nextprot.org/rdf#domainInfo`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a domain information annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	DomainInfo^c

editor^op # OPs

URI	`http://nextprot.org/rdf#editor`
Is Defined By	http://nextprot.org/rdf
Description	Links a publication to an editor
Domain(s)	Publication^c
Range(s)	Person^c

enzyme classification^op # OPs

URI	`http://nextprot.org/rdf#enzymeClassification`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an enzyme classification annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	EnzymeClassification^c

evidence^op # OPs

URI	`http://nextprot.org/rdf#evidence`
Is Defined By	http://nextprot.org/rdf
Description	Links an annotation to an evidence
Domain(s)	Annotation^c
Range(s)	Evidence^c

evidence code^op # OPs

URI	`http://nextprot.org/rdf#evidenceCode`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence to an evidence code
Domain(s)	Evidence^c
Range(s)	EvidenceCodeOntologyCv^c

existence^op # OPs

URI	`http://nextprot.org/rdf#existence`
Is Defined By	http://nextprot.org/rdf
Description	Links a protein entry to a protein existence level
Domain(s)	Protein^c
Range(s)	ProteinExistence^c

experimental context^op # OPs

URI	`http://nextprot.org/rdf#experimentalContext`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence to an experimental context
Domain(s)	Evidence^c
Range(s)	ExperimentalContext^c

expression^op # OPs

URI	`http://nextprot.org/rdf#expression`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an expression annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	Expression^c

expression information^op # OPs

URI	`http://nextprot.org/rdf#expressionInfo`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an expression information annotation
Super-properties	expression^op
Domain(s)	Isoform^c
Range(s)	ExpressionInfo^c

expression profile^op # OPs

URI	`http://nextprot.org/rdf#expressionProfile`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an expression profile annotation
Super-properties	expression^op
Domain(s)	Isoform^c
Range(s)	ExpressionProfile^c

family name^op # OPs

URI	`http://nextprot.org/rdf#familyName`
Is Defined By	http://nextprot.org/rdf
Description	Links a protein to a family name annotation
Super-properties	name^op
Domain(s)	Protein^c
Range(s)	FamilyName^c

from database^op # OPs

URI	`http://nextprot.org/rdf#fromDatabase`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence to the database of the cross reference that the evidence is based on
Domain(s)	Evidence^c
Range(s)	Database^c

function^op # OPs

URI	`http://nextprot.org/rdf#function`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a function annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	Function^c

function information^op # OPs

URI	`http://nextprot.org/rdf#functionInfo`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a function information annotation
Super-properties	function^op
Domain(s)	Isoform^c
Range(s)	FunctionInfo^c

gene^op # OPs

URI	`http://nextprot.org/rdf#gene`
Is Defined By	http://nextprot.org/rdf
Description	Links a protein to its encoding gene
Domain(s)	Protein^c
Range(s)	Gene^c

general annotation^op # OPs

URI	`http://nextprot.org/rdf#generalAnnotation`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a general annotation (function, expression, etc.)
Domain(s)	Isoform^c
Range(s)	GeneralAnnotation^c

glycosylation site^op # OPs

URI	`http://nextprot.org/rdf#glycosylationSite`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a glycosylation site annotation
Super-properties	ptm^op
Domain(s)	Isoform^c
Range(s)	GlycosylationSite^c

go biological process^op # OPs

URI	`http://nextprot.org/rdf#goBiologicalProcess`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a GO biological process annotation
Super-properties	function^op
Domain(s)	Isoform^c
Range(s)	GoBiologicalProcess^c

go cellular component^op # OPs

URI	`http://nextprot.org/rdf#goCellularComponent`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a GO cellular component annotation
Super-properties	cellular component^op
Domain(s)	Isoform^c
Range(s)	GoCellularComponent^c

go molecular function^op # OPs

URI	`http://nextprot.org/rdf#goMolecularFunction`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a GO molecular function annotation
Super-properties	function^op
Domain(s)	Isoform^c
Range(s)	GoMolecularFunction^c

helix^op # OPs

URI	`http://nextprot.org/rdf#helix`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a helix annotation
Super-properties	secondary structure^op
Domain(s)	Isoform^c
Range(s)	Helix^c

high expression^op # OPs

URI	`http://nextprot.org/rdf#highExpression`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a high level of expression
Super-properties	detected expression^op
Domain(s)	Isoform^c
Range(s)	ExpressionProfile^c

history^op # OPs

URI	`http://nextprot.org/rdf#history`
Is Defined By	http://nextprot.org/rdf
Description	Links a protein entry to its history in UniProt or neXtProt
Domain(s)	Protein^c
Range(s)	History^c

impacted object^op # OPs

URI	`http://nextprot.org/rdf#impactedObject`
Is Defined By	http://nextprot.org/rdf
Description	Links a phenotype variation annotation to an abnormal mammalian phenotype, electrophysiological parameter, binary interaction, protein property or GO annotation, or a disease-related variant to a disease
Domain(s)	(Disease-related variant^c or Phenotype variation^c)
Range(s)	http://nextprot.org/rdf#MammalianPhenotype http://nextprot.org/rdf#GoMolecularFunction http://nextprot.org/rdf#ElectrophysiologicalParameter http://nextprot.org/rdf#GoBiologicalProcess http://nextprot.org/rdf#GoCellularComponent http://nextprot.org/rdf#ProteinProperty http://nextprot.org/rdf#BinaryInteraction http://nextprot.org/rdf#Disease

induction^op # OPs

URI	`http://nextprot.org/rdf#induction`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an induction annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	Induction^c

initiator methionine^op # OPs

URI	`http://nextprot.org/rdf#initiatorMethionine`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an initiator methionine annotation
Super-properties	processing product^op
Domain(s)	Isoform^c
Range(s)	InitiatorMethionine^c

interactant^op # OPs

URI	`http://nextprot.org/rdf#interactant`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an interactant (an entry, isoform or cross-reference)
Domain(s)	(Binary interaction^c or Small molecule interaction^c or Cofactor^c or Interaction mapping^c or Binding site^c)
Range(s)	http://nextprot.org/rdf#Xref http://nextprot.org/rdf#Entry http://nextprot.org/rdf#Isoform

interacting region^op # OPs

URI	`http://nextprot.org/rdf#interactingRegion`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a interacting region annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	InteractingRegion^c

interaction^op # OPs

URI	`http://nextprot.org/rdf#interaction`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an interaction annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	Interaction^c

interaction information^op # OPs

URI	`http://nextprot.org/rdf#interactionInfo`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an interaction information annotation
Super-properties	interaction^op
Domain(s)	Isoform^c
Range(s)	InteractionInfo^c

interaction mapping^op # OPs

URI	`http://nextprot.org/rdf#interactionMapping`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an interaction mapping annotation
Super-properties	mapping^op
Domain(s)	Isoform^c
Range(s)	InteractionMapping^c

intramembrane region^op # OPs

URI	`http://nextprot.org/rdf#intramembraneRegion`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to an intramembrane region annotation
Super-properties	topology^op
Domain(s)	Isoform^c
Range(s)	IntramembraneRegion^c

isoform^op # OPs

URI	`http://nextprot.org/rdf#isoform`
Is Defined By	http://nextprot.org/rdf
Description	Links a protein entry to an isoform
Domain(s)	Protein^c
Range(s)	Isoform^c

kinetic km^op # OPs

URI	`http://nextprot.org/rdf#kineticKM`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a kinetic KM annotation
Super-properties	biophysicochemical property^op
Domain(s)	Isoform^c
Range(s)	KineticKM^c

kinetic note^op # OPs

URI	`http://nextprot.org/rdf#kineticNote`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a kinetic note annotation
Super-properties	biophysicochemical property^op
Domain(s)	Isoform^c
Range(s)	KineticNote^c

kinetic vmax^op # OPs

URI	`http://nextprot.org/rdf#kineticVmax`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a kinetic Vmax annotation
Super-properties	biophysicochemical property^op
Domain(s)	Isoform^c
Range(s)	KineticVmax^c

lipid moiety-binding region^op # OPs

URI	`http://nextprot.org/rdf#lipidationSite`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a lipid moiety-binding region annotation
Super-properties	ptm^op
Domain(s)	Isoform^c
Range(s)	LipidationSite^c

low expression^op # OPs

URI	`http://nextprot.org/rdf#lowExpression`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a low level of expression
Super-properties	detected expression^op
Domain(s)	Isoform^c
Range(s)	ExpressionProfile^c

mapping^op # OPs

URI	`http://nextprot.org/rdf#mapping`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a mapping annotation (antibody mapping, peptide mapping, etc.)
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	Mapping^c

mature protein^op # OPs

URI	`http://nextprot.org/rdf#matureProtein`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a mature protein annotation
Super-properties	processing product^op
Domain(s)	Isoform^c
Range(s)	MatureProtein^c

medical^op # OPs

URI	`http://nextprot.org/rdf#medical`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a medical annotation (disease, pharmaceutical, etc.)
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	Medical^c

medium expression^op # OPs

URI	`http://nextprot.org/rdf#mediumExpression`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a medium level of expression
Super-properties	detected expression^op
Domain(s)	Isoform^c
Range(s)	ExpressionProfile^c

metal binding site^op # OPs

URI	`http://nextprot.org/rdf#metalBindingSite`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a metal binding site annotation
Super-properties	site^op
Domain(s)	Isoform^c
Range(s)	MetalBindingSite^c

miscellaneous^op # OPs

URI	`http://nextprot.org/rdf#miscellaneous`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a miscellaneous annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	Miscellaneous^c

miscellaneous region^op # OPs

URI	`http://nextprot.org/rdf#miscellaneousRegion`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a miscellaneous region annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	MiscellaneousRegion^c

miscellaneous site^op # OPs

URI	`http://nextprot.org/rdf#miscellaneousSite`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a miscellaneous site annotation
Super-properties	site^op
Domain(s)	Isoform^c
Range(s)	MiscellaneousSite^c

mitochondrial transit peptide^op # OPs

URI	`http://nextprot.org/rdf#mitochondrialTransitPeptide`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a mitochondrial transit peptide annotation
Super-properties	processing product^op
Domain(s)	Isoform^c
Range(s)	MitochondrialTransitPeptide^c

modified residue^op # OPs

URI	`http://nextprot.org/rdf#modifiedResidue`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a modified residue annotation
Super-properties	ptm^op
Domain(s)	Isoform^c
Range(s)	ModifiedResidue^c

mutagenesis^op # OPs

URI	`http://nextprot.org/rdf#mutagenesis`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a mutagenesis annotation
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	Mutagenesis^c

name^op # OPs

URI	`http://nextprot.org/rdf#name`
Is Defined By	http://nextprot.org/rdf
Description	Most general property linking a protein, isoform or gene to a name. Also used for person and consortium
Domain(s)	(Protein^c or Isoform^c or Gene^c or Person^c or Consortium^c)
Range(s)	http://nextprot.org/rdf#Name http://www.w3.org/2001/XMLSchema#string

negative evidence^op # OPs

URI	`http://nextprot.org/rdf#negativeEvidence`
Is Defined By	http://nextprot.org/rdf
Description	Links an annotation to an evidence that contradicts the annotation statement
Domain(s)	Annotation^c
Range(s)	Evidence^c

non-consecutive residue^op # OPs

URI	`http://nextprot.org/rdf#nonConsecutiveResidue`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a non-consecutive residue annotation
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	NonConsecutiveResidue^c

non-terminal residue^op # OPs

URI	`http://nextprot.org/rdf#nonTerminalResidue`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a non-terminal residue annotation
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	NonTerminalResidue^c

nucleotide phosphate-binding region^op # OPs

URI	`http://nextprot.org/rdf#nucleotidePhosphateBindingRegion`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a nucleotide phosphate-binding region annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	NucleotidePhosphateBindingRegion^c

observed expression^op # OPs

URI	`http://nextprot.org/rdf#observedExpression`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence to an observed expression level
Domain(s)	Evidence^c
Range(s)	ObservedExpression^c

orf name^op # OPs

URI	`http://nextprot.org/rdf#orfName`
Is Defined By	http://nextprot.org/rdf
Description	Links a gene to an ORF name
Super-properties	name^op
Domain(s)	(Protein^c or Gene^c)
Range(s)	ORFName^c

other name^op # OPs

URI	`http://nextprot.org/rdf#otherName`
Is Defined By	http://nextprot.org/rdf
Description	Links the recommended name of an entity to another name which is sometimes used to refer to the same entity
Domain(s)	Name^c
Range(s)	Name^c

pathway^op # OPs

URI	`http://nextprot.org/rdf#pathway`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a pathway annotation
Super-properties	function^op
Domain(s)	Isoform^c
Range(s)	Pathway^c

pdb mapping^op # OPs

URI	`http://nextprot.org/rdf#pdbMapping`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a PDB mapping annotation
Super-properties	mapping^op
Domain(s)	Isoform^c
Range(s)	PdbMapping^c

peptide mapping^op # OPs

URI	`http://nextprot.org/rdf#peptideMapping`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a peptide mapping annotation
Super-properties	mapping^op
Domain(s)	Isoform^c
Range(s)	PeptideMapping^c

peroxisome transit peptide^op # OPs

URI	`http://nextprot.org/rdf#peroxisomeTransitPeptide`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a peroxisome transit peptide annotation
Super-properties	processing product^op
Domain(s)	Isoform^c
Range(s)	PeroxisomeTransitPeptide^c

pH dependence^op # OPs

URI	`http://nextprot.org/rdf#phDependence`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a pH dependence annotation
Super-properties	biophysicochemical property^op
Domain(s)	Isoform^c
Range(s)	PhDependence^c

pharmaceutical^op # OPs

URI	`http://nextprot.org/rdf#pharmaceutical`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a pharmaceutical annotation
Super-properties	medical^op
Domain(s)	Isoform^c
Range(s)	Pharmaceutical^c

phenotype variation^op # OPs

URI	`http://nextprot.org/rdf#phenotypicVariation`
Is Defined By	http://nextprot.org/rdf
Description	Links a proteoform to a phenotype variation annotation
Super-properties	general annotation^op
Domain(s)	Proteoform^c
Range(s)	PhenotypicVariation^c

positional annotation^op # OPs

URI	`http://nextprot.org/rdf#positionalAnnotation`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a positional annotation
Domain(s)	Isoform^c
Range(s)	PositionalAnnotation^c

processing product^op # OPs

URI	`http://nextprot.org/rdf#processingProduct`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a processing product annotation
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	ProcessingProduct^c

maturation peptide^op # OPs

URI	`http://nextprot.org/rdf#propeptide`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a maturation peptide annotation
Super-properties	processing product^op
Domain(s)	Isoform^c
Range(s)	Propeptide^c

proteoform^op # OPs

URI	`http://nextprot.org/rdf#proteoform`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a proteoform
Domain(s)	Isoform^c
Range(s)	Proteoform^c

provenance^op # OPs

URI	`http://nextprot.org/rdf#provenance`
Is Defined By	http://nextprot.org/rdf
Description	Links a cross-reference or identifier to its database
Domain(s)	(Cross reference^c or Identifier^c)
Range(s)	Database^c

ptm^op # OPs

URI	`http://nextprot.org/rdf#ptm`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a post-translational modification (PTM) annotation
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	Ptm^c

ptm information^op # OPs

URI	`http://nextprot.org/rdf#ptmInfo`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a post-translational modification (PTM) information annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	PtmInfo^c

quality^op # OPs

URI	`http://nextprot.org/rdf#quality`
Is Defined By	http://nextprot.org/rdf
Description	Links an annotation or evidence to a quality qualifier
Domain(s)	(Annotation^c or Evidence^c)
Range(s)	QualityQualifier^c

recommended name^op # OPs

URI	`http://nextprot.org/rdf#recommendedName`
Is Defined By	http://nextprot.org/rdf
Description	Links a protein entry, isoform or gene to a recommended name
Super-properties	name^op
Domain(s)	(Protein^c or Isoform^c or Gene^c)
Range(s)	Name^c

redox potential^op # OPs

URI	`http://nextprot.org/rdf#redoxPotential`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a redox potential annotation
Super-properties	biophysicochemical property^op
Domain(s)	Isoform^c
Range(s)	RedoxPotential^c

reference^op # OPs

URI	`http://nextprot.org/rdf#reference`
Is Defined By	http://nextprot.org/rdf
Description	Links an entry or an evidence to an identifier, a publication or a cross-reference
Domain(s)	(Evidence^c or Protein^c)
Range(s)	http://nextprot.org/rdf#Xref http://nextprot.org/rdf#Identifier http://nextprot.org/rdf#Publication

region^op # OPs

URI	`http://nextprot.org/rdf#region`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a region annotation
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	Region^c

repeat^op # OPs

URI	`http://nextprot.org/rdf#repeat`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a repeat annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	Repeat^c

secondary structure^op # OPs

URI	`http://nextprot.org/rdf#secondaryStructure`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a secondary structure annotation
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	SecondaryStructure^c

selenocysteine^op # OPs

URI	`http://nextprot.org/rdf#selenocysteine`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a selenocysteine annotation
Super-properties	ptm^op
Domain(s)	Isoform^c
Range(s)	Selenocysteine^c

protein sequence^op # OPs

URI	`http://nextprot.org/rdf#sequence`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a sequence
Domain(s)	Isoform^c
Range(s)	ProteinSequence^c

sequence caution^op # OPs

URI	`http://nextprot.org/rdf#sequenceCaution`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a sequence caution annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	SequenceCaution^c

sequence conflict^op # OPs

URI	`http://nextprot.org/rdf#sequenceConflict`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a sequence conflict annotation
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	SequenceConflict^c

short sequence motif^op # OPs

URI	`http://nextprot.org/rdf#shortSequenceMotif`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a short sequence motif annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	ShortSequenceMotif^c

signal peptide^op # OPs

URI	`http://nextprot.org/rdf#signalPeptide`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a signal peptide annotation
Super-properties	processing product^op
Domain(s)	Isoform^c
Range(s)	SignalPeptide^c

site^op # OPs

URI	`http://nextprot.org/rdf#site`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a site annotation (active site, binding site, etc.)
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	Site^c

small molecule interaction^op # OPs

URI	`http://nextprot.org/rdf#smallMoleculeInteraction`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a small molecule interaction annotation
Super-properties	interaction^op
Domain(s)	Isoform^c
Range(s)	SmallMoleculeInteraction^c

srm peptide mapping^op # OPs

URI	`http://nextprot.org/rdf#srmPeptideMapping`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a SRM peptide mapping annotation
Super-properties	mapping^op
Domain(s)	Isoform^c
Range(s)	SrmPeptideMapping^c

subcellular location^op # OPs

URI	`http://nextprot.org/rdf#subcellularLocation`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a subcellular location annotation
Super-properties	cellular component^op
Domain(s)	Isoform^c
Range(s)	SubcellularLocation^c

subcellular location information^op # OPs

URI	`http://nextprot.org/rdf#subcellularLocationNote`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a subcellular location information annotation
Super-properties	cellular component^op
Domain(s)	Isoform^c
Range(s)	SubcellularLocationNote^c

temperature dependence^op # OPs

URI	`http://nextprot.org/rdf#temperatureDependence`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a temperature dependence annotation
Super-properties	biophysicochemical property^op
Domain(s)	Isoform^c
Range(s)	TemperatureDependence^c

term^op # OPs

URI	`http://nextprot.org/rdf#term`
Is Defined By	http://nextprot.org/rdf
Description	Links an annotation to a term
Domain(s)	(General Annotation^c or Positional annotation^c)
Range(s)	Term^c

tissue^op # OPs

URI	`http://nextprot.org/rdf#tissue`
Is Defined By	http://nextprot.org/rdf
Description	Links an experimental context to a tissue
Domain(s)	Experimental context^c
Range(s)	NextprotAnatomyCv^c

topological domain^op # OPs

URI	`http://nextprot.org/rdf#topologicalDomain`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a topological domain annotation
Super-properties	topology^op
Domain(s)	Isoform^c
Range(s)	TopologicalDomain^c

topology^op # OPs

URI	`http://nextprot.org/rdf#topology`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a topology annotation
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	Topology^c

transmembrane region^op # OPs

URI	`http://nextprot.org/rdf#transmembraneRegion`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a transmembrane region annotation
Super-properties	topology^op
Domain(s)	Isoform^c
Range(s)	TransmembraneRegion^c

transport activity^op # OPs

URI	`http://nextprot.org/rdf#transportActivity`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a transport activity annotation
Super-properties	function^op
Domain(s)	Isoform^c
Range(s)	TransportActivity^c

turn^op # OPs

URI	`http://nextprot.org/rdf#turn`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a turn annotation
Super-properties	secondary structure^op
Domain(s)	Isoform^c
Range(s)	Turn^c

undetected expression^op # OPs

URI	`http://nextprot.org/rdf#undetectedExpression`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to undetected level of expression in all experiments
Super-properties	expression^op
Domain(s)	Isoform^c
Range(s)	ExpressionProfile^c

uniprot keyword^op # OPs

URI	`http://nextprot.org/rdf#uniprotKeyword`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a UniProt keyword annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	UniprotKeyword^c

variant^op # OPs

URI	`http://nextprot.org/rdf#variant`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a variant annotation
Super-properties	positional annotation^op
Domain(s)	Isoform^c
Range(s)	Variant^c

variant information^op # OPs

URI	`http://nextprot.org/rdf#variantInfo`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a variant information annotation
Super-properties	general annotation^op
Domain(s)	Isoform^c
Range(s)	VariantInfo^c

zinc finger region^op # OPs

URI	`http://nextprot.org/rdf#zincFingerRegion`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform to a zinc finger region annotation
Super-properties	region^op
Domain(s)	Isoform^c
Range(s)	ZincFingerRegion^c

Named Individuals ↑

ABCD
ARUK-UCL
Affymetrix
AgBase
Allergome
Alzheimers_University_of_Toronto
Antibodypedia
BHF-UCL
BMRB
BRENDA
Bgee
Bgee
BindingDB
BioCyc
BioGRID
BioGRID-ORCS
BioMuta
Bronze
CACAO
CAFA
CAZy
CCDS
CDD
CORUM
CPTAC
CPTC
CTD
CarbonylDB
Cellosaurus
ChEBI
ChEMBL
ChiTaRS
Colocalizes with
ComplexPortal
ComplexPortal
Contributes to
Cosmic
Cosmic
DDBJ
DECIPHER
DEPOD
DFLAT
DIP
DKFZ
DMDM
DNASU
DOI
DOSAC-COBS-2DPAGE
DYP
DisGeNET
DisProt
DrugBank
DrugBank
DrugCentral
Dyp
ELM
EMBL
EMBL-CDS
ENYO
EPD
ESTHER
Enables
Ensembl
Ensembl
Evidence at protein level
Evidence at transcript level
EvolutionaryTrace
Expression detected
ExpressionAtlas
FLJ
FlyBase
GDB
GFP-cDNA
GFP-cDNA@EMBL
GOA
GOC
GO_REF
GO_central
Gene3D
GeneCards
GeneDB
GeneID
GeneReviews
GeneTree
GeneWiki
Genevisible
GenomeRNAi
GlyConnect
GlyConnect
GlyGen
Gold
GuidetoPHARMACOLOGY
HAMAP
HAMAP-Rule
HGNC
HGNC
HGNC-UCL
HOGENOM
HPA
HPRD
High expression detected
Human_protein_atlas
IDEAL
IMAGE
IMGT_GENE-DB
IPI
Illumina
InParanoid
Inferred from homology
IntAct
IntAct
InterPro
InterPro
Is active in
KEGG
KEGGPathway
KEGG_PTW
KIAA
LIFEdb
LOC
Located in
Low expression detected
MDATA_0004_2011
MDATA_0023_2012
MDATA_0033_2013
MEROPS
MGC
MGI
MGI
MIM
MINT
MTBbase
MalaCards
MassIVE
MassIVE
MassIVE_human_Adrenal_Gland
MassIVE_human_Blood_Cells
MassIVE_human_Blood_Plasma
MassIVE_human_Blood_Vessel
MassIVE_human_Bone
MassIVE_human_Brain
MassIVE_human_Breast
MassIVE_human_Cancer_Blood_Cells
MassIVE_human_Cancer_Bone
MassIVE_human_Cancer_Brain
MassIVE_human_Cancer_Breast
MassIVE_human_Cancer_Cell_Lines_Blood
MassIVE_human_Cancer_Cell_Lines_Bone
MassIVE_human_Cancer_Cell_Lines_Brain
MassIVE_human_Cancer_Cell_Lines_Breast
MassIVE_human_Cancer_Cell_Lines_Colon
MassIVE_human_Cancer_Cell_Lines_Digestive_System
MassIVE_human_Cancer_Cell_Lines_Liver
MassIVE_human_Cancer_Cell_Lines_Lung
MassIVE_human_Cancer_Cell_Lines_Other_Anatomical_Entities
MassIVE_human_Cancer_Cell_Lines_Other_Female_Reproductive_Organ
MassIVE_human_Cancer_Cell_Lines_Other_Gestational_Structure
MassIVE_human_Cancer_Cell_Lines_Ovary
MassIVE_human_Cancer_Cell_Lines_Skin
MassIVE_human_Cancer_Digestive_System
MassIVE_human_Cancer_Kidney
MassIVE_human_Cancer_Liver
MassIVE_human_Cancer_Lung
MassIVE_human_Cancer_Other_Male_Reproductive_Organ
MassIVE_human_Cancer_Ovary
MassIVE_human_Cancer_Skin
MassIVE_human_Cancer_Urinary_Bladder
MassIVE_human_Cerebrospinal_Fluid
MassIVE_human_Digestive_System
MassIVE_human_Eye
MassIVE_human_Heart
MassIVE_human_Kidney
MassIVE_human_Liver
MassIVE_human_Lung
MassIVE_human_Muscle
MassIVE_human_Non_Cancer_Cell_Lines
MassIVE_human_Olfactory_System
MassIVE_human_Oocyte
MassIVE_human_Other_Anatomical_Entities
MassIVE_human_Other_Female_Reproductive_Organ
MassIVE_human_Other_Gestational_Structure
MassIVE_human_Other_Male_Reproductive_Organ
MassIVE_human_Other_Respiratory_Organ
MassIVE_human_Ovary
MassIVE_human_Pancreas
MassIVE_human_Pituitary_Gland
MassIVE_human_Placenta
MassIVE_human_Skin
MassIVE_human_Sperm
MassIVE_human_Spleen
MassIVE_human_Testis
MassIVE_human_Thyroid_Gland
MassIVE_human_Ureter
MassIVE_human_Urinary_Bladder
MassIVE_human_Urine
MaxQB
Medium expression detected
MetOSite
Mild
Moderate
MoonDB
MoonProt
NCBI_Taxonomy
NIAGADS
NTNU_SB
NextProt
No expression detected
OGP
OMA
OpenTargets
Orphanet
Orphanet
OrthoDB
Other sources
PANTHER
PATRIC
PCDDB
PDB
PDBsum
PINC
PIR
PIRNR
PIRSF
PIRSR
PMID_20140087
PMID_20570859
PMID_20687582
PMID_20797634
PMID_20972266
PMID_21139048
PMID_21645671
PMID_21890473
PMID_22148984
PMID_22865923
PMID_23236377
PMID_23266961
PMID_23584533
PMID_23955771
PMID_24129315
PMID_25038526
PMID_25218447
PRIDE
PRINTS
PRO
PROSITE
PROSITE-ProRule
ParkinsonsUK-UCL
Part of
PathwayCommons
PaxDb
PeptideAtlas
PeptideAtlas
PeptideAtlas_human_Adrenal_Gland
PeptideAtlas_human_Blood_Cells
PeptideAtlas_human_Blood_Plasma
PeptideAtlas_human_Brain
PeptideAtlas_human_Breast
PeptideAtlas_human_Cancer_Adrenal_Gland
PeptideAtlas_human_Cancer_Brain
PeptideAtlas_human_Cancer_Breast
PeptideAtlas_human_Cancer_Cell_Lines_Blood
PeptideAtlas_human_Cancer_Cell_Lines_Bone
PeptideAtlas_human_Cancer_Cell_Lines_Brain
PeptideAtlas_human_Cancer_Cell_Lines_Breast
PeptideAtlas_human_Cancer_Cell_Lines_Digestive_System
PeptideAtlas_human_Cancer_Cell_Lines_Kidney
PeptideAtlas_human_Cancer_Cell_Lines_Liver
PeptideAtlas_human_Cancer_Cell_Lines_Lung
PeptideAtlas_human_Cancer_Cell_Lines_Other_Anatomical_Entities
PeptideAtlas_human_Cancer_Cell_Lines_Other_Female_Reproductive_Organ
PeptideAtlas_human_Cancer_Cell_Lines_Other_Male_Reproductive_Organ
PeptideAtlas_human_Cancer_Cell_Lines_Ovary
PeptideAtlas_human_Cancer_Cell_Lines_Pancreas
PeptideAtlas_human_Cancer_Cell_Lines_Skin
PeptideAtlas_human_Cancer_Cell_Lines_Urinary_Bladder
PeptideAtlas_human_Cancer_Digestive_System
PeptideAtlas_human_Cancer_Kidney
PeptideAtlas_human_Cancer_Liver
PeptideAtlas_human_Cancer_Lung
PeptideAtlas_human_Cancer_Other_Anatomical_Entities
PeptideAtlas_human_Cancer_Other_Female_Reproductive_Organ
PeptideAtlas_human_Cancer_Other_Male_Reproductive_Organ
PeptideAtlas_human_Cancer_Ovary
PeptideAtlas_human_Cancer_Pancreas
PeptideAtlas_human_Cancer_Skin
PeptideAtlas_human_Cancer_Urinary_Bladder
PeptideAtlas_human_Cancer_and_Non_Cancer_Cell_Lines
PeptideAtlas_human_Cerebrospinal_Fluid
PeptideAtlas_human_Digestive_System
PeptideAtlas_human_Eye
PeptideAtlas_human_Heart
PeptideAtlas_human_Kidney
PeptideAtlas_human_Liver
PeptideAtlas_human_Lung
PeptideAtlas_human_Muscle
PeptideAtlas_human_Non_Cancer_Cell_Lines
PeptideAtlas_human_Olfactory_System
PeptideAtlas_human_Oocyte
PeptideAtlas_human_Other_Anatomical_Entities
PeptideAtlas_human_Other_Female_Reproductive_Organ
PeptideAtlas_human_Other_Gestational_Structure
PeptideAtlas_human_Other_Male_Reproductive_Organ
PeptideAtlas_human_Other_Respiratory_Organ
PeptideAtlas_human_Ovary
PeptideAtlas_human_Pancreas
PeptideAtlas_human_Pituitary_Gland
PeptideAtlas_human_Placenta
PeptideAtlas_human_Skin
PeptideAtlas_human_Sperm
PeptideAtlas_human_Spleen
PeptideAtlas_human_Testis
PeptideAtlas_human_Thyroid_Gland
PeptideAtlas_human_Ureter
PeptideAtlas_human_Urinary_Bladder
PeptideAtlas_human_Urine
PeptideAtlas_human_phosphoproteome
PeroxiBase
Pfam
PharmGKB
Pharos
PhosphoSitePlus
PhylomeDB
Predicted
Proteomes
ProteomicsDB
PubMed
REBASE
REPRODUCTION-2DPAGE
RHEA
RNAct
Reactome
Reactome
RefSeq
Rhea
RuleBase
SABIO-RK
SAM
SASBDB
SFLD
SGD
SIGNOR
SMART
SMR
SRMAtlas
SRMAtlas
STRING
SUPFAM
SWISS-2DPAGE
SYSCILIA_CCNET
Severe
SignaLink
Silver
SwissLipids
SwissPalm
SynGO
SynGO-UCL
TCDB
TCDB
TIGRFAMs
TopDownProteomics
TreeFam
UCD-2DPAGE
UCSC
Uncertain
UniLectin
UniPathway
UniProt
UniProtKB
Uniprot
VEuPathDB
WB
YuBioLab
dbSNP
dbSNP
dictyBase
eggNOG
gnomAD
gnomAD
iPTMnet
jPOST
neXtProt
neXtProtSubmission

Bronzeⁿⁱ

Class(es)

QualityQualifier
owl:Thing

URI	`http://nextprot.org/rdf#BRONZE`
Is Defined By	http://nextprot.org/rdf
Description	Quality qualifier describing unreliable annotation or evidence. Excluded from neXtProt.

Colocalizes withⁿⁱ

Class(es)

owl:Thing
GoQualifier

URI	`http://nextprot.org/rdf#Colocalizes_with`
Is Defined By	http://nextprot.org/rdf
Description	GO qualifier used to modify the GO cellular component annotation of a protein when the protein transiently or peripherically associates with an organelle or a complex.

Contributes toⁿⁱ

Class(es)

owl:Thing
GoQualifier

URI	`http://nextprot.org/rdf#Contributes_to`
Is Defined By	http://nextprot.org/rdf
Description	GO qualifier used to modify the molecular function annotation of a protein which is a member of a complex that is defined as an “irreducible molecular machine” - where a particular molecular function cannot be ascribed to an individual subunit or small set of subunits of a complex.

Enablesⁿⁱ

Class(es)

owl:Thing
GoQualifier

URI	`http://nextprot.org/rdf#Enables`
Is Defined By	http://nextprot.org/rdf

Evidence at protein levelⁿⁱ

Class(es)

ProteinExistence
owl:Thing

URI	`http://nextprot.org/rdf#Evidence_at_protein_level`
Is Defined By	http://nextprot.org/rdf
Description	Entry whose protein(s) existence is based on evidence at protein level (PE1).

Evidence at transcript levelⁿⁱ

Class(es)

owl:Thing
ProteinExistence

URI	`http://nextprot.org/rdf#Evidence_at_transcript_level`
Is Defined By	http://nextprot.org/rdf
Description	Entry whose protein existence is based on evidence at transcript level (PE2).

Goldⁿⁱ

Class(es)

QualityQualifier
owl:Thing

URI	`http://nextprot.org/rdf#GOLD`
Is Defined By	http://nextprot.org/rdf
Description	Quality qualifier describing highly reliable annotation or evidence.

High expression detectedⁿⁱ

Class(es)

owl:Thing
ObservedExpression

URI	`http://nextprot.org/rdf#High`
Is Defined By	http://nextprot.org/rdf
Description	Expression of the gene product(s) is high.

Inferred from homologyⁿⁱ

Class(es)

ProteinExistence
owl:Thing

URI	`http://nextprot.org/rdf#Inferred_from_homology`
Is Defined By	http://nextprot.org/rdf
Description	Entry whose protein existence is based on homology (PE3).

Is active inⁿⁱ

Class(es)

owl:Thing
GoQualifier

URI	`http://nextprot.org/rdf#Is_active_in`
Is Defined By	http://nextprot.org/rdf

Located inⁿⁱ

Class(es)

owl:Thing
GoQualifier

URI	`http://nextprot.org/rdf#Located_in`
Is Defined By	http://nextprot.org/rdf

Low expression detectedⁿⁱ

Class(es)

owl:Thing
ObservedExpression

URI	`http://nextprot.org/rdf#Low`
Is Defined By	http://nextprot.org/rdf
Description	Expression of the gene product(s) is low.

Medium expression detectedⁿⁱ

Class(es)

owl:Thing
ObservedExpression

URI	`http://nextprot.org/rdf#Medium`
Is Defined By	http://nextprot.org/rdf
Description	Expression of the gene product(s) is medium (neither high, nor low).

Mildⁿⁱ

Class(es)

owl:Thing
Severity

URI	`http://nextprot.org/rdf#Mild`
Is Defined By	http://nextprot.org/rdf

Moderateⁿⁱ

Class(es)

owl:Thing
Severity

URI	`http://nextprot.org/rdf#Moderate`
Is Defined By	http://nextprot.org/rdf

No expression detectedⁿⁱ

Class(es)

owl:Thing
ObservedExpression

URI	`http://nextprot.org/rdf#Negative`
Is Defined By	http://nextprot.org/rdf
Description	Expression of the gene product(s) is not detectable.

Part ofⁿⁱ

Class(es)

owl:Thing
GoQualifier

URI	`http://nextprot.org/rdf#Part_of`
Is Defined By	http://nextprot.org/rdf

Expression detectedⁿⁱ

Class(es)

owl:Thing
ObservedExpression

URI	`http://nextprot.org/rdf#Positive`
Is Defined By	http://nextprot.org/rdf
Description	Expression of the gene product(s) is detectable.

Predictedⁿⁱ

Class(es)

owl:Thing
ProteinExistence

URI	`http://nextprot.org/rdf#Predicted`
Is Defined By	http://nextprot.org/rdf
Description	Entry whose protein existence is based on a prediction (gene model) (PE4).

Silverⁿⁱ

Class(es)

QualityQualifier
owl:Thing

URI	`http://nextprot.org/rdf#SILVER`
Is Defined By	http://nextprot.org/rdf
Description	Quality qualifier describing reliable annotation or evidence.

Severeⁿⁱ

Class(es)

owl:Thing
Severity

URI	`http://nextprot.org/rdf#Severe`
Is Defined By	http://nextprot.org/rdf

Uncertainⁿⁱ

Class(es)

ProteinExistence
owl:Thing

URI	`http://nextprot.org/rdf#Uncertain`
Is Defined By	http://nextprot.org/rdf
Description	Entry whose protein existence is uncertain (PE5).

ABCDⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/ABCD`
Is Defined By	http://nextprot.org/rdf
Description	ABCD curated depository of sequenced antibodies
See Also	https://web.expasy.org/abcd

Affymetrixⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Affymetrix`
Is Defined By	http://nextprot.org/rdf
Description	Affymetrix microarray clone identifier

Allergomeⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Allergome`
Is Defined By	http://nextprot.org/rdf
Description	Allergome; a platform for allergen knowledge
See Also	http://www.allergome.org/

Antibodypediaⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Antibodypedia`
Is Defined By	http://nextprot.org/rdf
Description	Antibodypedia a portal for validated antibodies
See Also	https://antibodypedia.com/

BMRBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/BMRB`
Is Defined By	http://nextprot.org/rdf
Description	Biological Magnetic Resonance Data Bank
See Also	https://bmrb.io/

BRENDAⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/BRENDA`
Is Defined By	http://nextprot.org/rdf
Description	BRENDA Comprehensive Enzyme Information System
See Also	https://www.brenda-enzymes.org

Bgeeⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Bgee`
Is Defined By	http://nextprot.org/rdf
Description	Bgee database of gene expression across multiple animal species
See Also	https://bgee.org

BindingDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/BindingDB`
Is Defined By	http://nextprot.org/rdf
Description	BindingDB database of measured binding affinities
See Also	https://www.bindingdb.org/

BioCycⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/BioCyc`
Is Defined By	http://nextprot.org/rdf
Description	BioCyc Collection of Pathway/Genome Databases
See Also	https://www.biocyc.org/

BioGRIDⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/BioGRID`
Is Defined By	http://nextprot.org/rdf
Description	The Biological General Repository for Interaction Datasets (BioGRID)
See Also	https://thebiogrid.org/

BioGRID-ORCSⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/BioGRID-ORCS`
Is Defined By	http://nextprot.org/rdf
Description	BioGRID ORCS database of CRISPR phenotype screens
See Also	https://orcs.thebiogrid.org

BioMutaⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/BioMuta`
Is Defined By	http://nextprot.org/rdf
Description	BioMuta curated single-nucleotide variation and disease association database
See Also	https://hive.biochemistry.gwu.edu/tools/biomuta/

CAZyⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/CAZy`
Is Defined By	http://nextprot.org/rdf
Description	Carbohydrate-Active enZymes
See Also	http://www.cazy.org/

CCDSⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/CCDS`
Is Defined By	http://nextprot.org/rdf
Description	The Consensus CDS (CCDS) project
See Also	https://www.ncbi.nlm.nih.gov/CCDS

CDDⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/CDD`
Is Defined By	http://nextprot.org/rdf
Description	Conserved Domains Database
See Also	https://www.ncbi.nlm.nih.gov/cdd

CORUMⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/CORUM`
Is Defined By	http://nextprot.org/rdf
Description	CORUM comprehensive resource of mammalian protein complexes
See Also	http://mips.helmholtz-muenchen.de/corum/

CPTACⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/CPTAC`
Is Defined By	http://nextprot.org/rdf
Description	The CPTAC Assay portal
See Also	https://assays.cancer.gov/

CPTCⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/CPTC`
Is Defined By	http://nextprot.org/rdf
Description	The CPTC Antibody Portal
See Also	https://antibodies.cancer.gov

CTDⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/CTD`
Is Defined By	http://nextprot.org/rdf
Description	Comparative Toxicogenomics Database
See Also	https://ctdbase.org/

CarbonylDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/CarbonylDB`
Is Defined By	http://nextprot.org/rdf
Description	CarbonylDB database of protein carbonylation sites
See Also	http://digbio.missouri.edu/CarbonylDB/

ChEBIⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/ChEBI`
Is Defined By	http://nextprot.org/rdf
Description	Chemical Entities of Biological Interest
See Also	http://www.ebi.ac.uk/chebi/

ChEMBLⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/ChEMBL`
Is Defined By	http://nextprot.org/rdf
Description	ChEMBL database of bioactive drug-like small molecules
See Also	https://www.ebi.ac.uk/chembldb

ChiTaRSⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/ChiTaRS`
Is Defined By	http://nextprot.org/rdf
Description	ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data
See Also	http://chitars.md.biu.ac.il/

ComplexPortalⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/ComplexPortal`
Is Defined By	http://nextprot.org/rdf
Description	ComplexPortal: manually curated resource of macromolecular complexes
See Also	https://www.ebi.ac.uk/complexportal/

Cosmicⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Cosmic`
Is Defined By	http://nextprot.org/rdf
Description	COSMIC, the Catalogue Of Somatic Mutations In Cancer
See Also	http://www.sanger.ac.uk/perl/genetics/CGP/core_line_viewer?action=cell_lines

DDBJⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DDBJ`
Is Defined By	http://nextprot.org/rdf
Description	DNA Data Bank of Japan; a nucleotide sequence database
See Also	https://www.ddbj.nig.ac.jp/index-e.html

DECIPHERⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DECIPHER`
Is Defined By	http://nextprot.org/rdf
Description	DECIPHER - Mapping the clinical genome
See Also	https://www.deciphergenomics.org/

DEPODⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DEPOD`
Is Defined By	http://nextprot.org/rdf
Description	DEPOD human dephosphorylation database
See Also	http://depod.bioss.uni-freiburg.de

DIPⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DIP`
Is Defined By	http://nextprot.org/rdf
Description	Database of interacting proteins
See Also	https://dip.doe-mbi.ucla.edu/

DKFZⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DKFZ`
Is Defined By	http://nextprot.org/rdf
Description	DKFZ (Deutsches Krebsforschungszentrum) identifier

DMDMⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DMDM`
Is Defined By	http://nextprot.org/rdf
Description	Domain mapping of disease mutations (DMDM)
See Also	http://bioinf.umbc.edu/dmdm/

DNASUⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DNASU`
Is Defined By	http://nextprot.org/rdf
Description	The DNASU plasmid repository
See Also	https://dnasu.org/DNASU/

DOIⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DOI`
Is Defined By	http://nextprot.org/rdf
Description	Digital Object Identifier
See Also	http://dx.doi.org/

DOSAC-COBS-2DPAGEⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DOSAC-COBS-2DPAGE`
Is Defined By	http://nextprot.org/rdf
Description	DOSAC-COBS 2D-PAGE database
See Also	http://www.dosac.unipa.it/2d/

DYPⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DYP`
Is Defined By	http://nextprot.org/rdf
Description	The Kahn Dynamic Proteomics Database
See Also	http://www.weizmann.ac.il/mcb/UriAlon/DynamProt/

DisGeNETⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DisGeNET`
Is Defined By	http://nextprot.org/rdf
Description	DisGeNET, a database of gene-disease associations
See Also	https://www.disgenet.org/

DisProtⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DisProt`
Is Defined By	http://nextprot.org/rdf
Description	Database of protein disorder
See Also	https://disprot.org

DrugBankⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DrugBank`
Is Defined By	http://nextprot.org/rdf
Description	Drug and drug target database
See Also	https://www.drugbank.ca/

DrugCentralⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/DrugCentral`
Is Defined By	http://nextprot.org/rdf
Description	DrugCentral
See Also	https://drugcentral.org/

ELMⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/ELM`
Is Defined By	http://nextprot.org/rdf
Description	The Eukaryotic Linear Motif resource for Functional Sites in Proteins
See Also	http://elm.eu.org/

EMBLⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/EMBL`
Is Defined By	http://nextprot.org/rdf
Description	EMBL nucleotide sequence database
See Also	https://www.ebi.ac.uk/ena

EMBL-CDSⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/EMBL-CDS`
Is Defined By	http://nextprot.org/rdf
Description	EMBL coding sequence (CDS) database
See Also	http://www.ebi.ac.uk/embl/

EPDⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/EPD`
Is Defined By	http://nextprot.org/rdf
Description	Encyclopedia of Proteome Dynamics
See Also	https://www.peptracker.com/epd/analytics/

ESTHERⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/ESTHER`
Is Defined By	http://nextprot.org/rdf
Description	ESTHER database of the Alpha/Beta-hydrolase fold superfamily of proteins
See Also	http://bioweb.supagro.inra.fr/ESTHER/general?what=index

Ensemblⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Ensembl`
Is Defined By	http://nextprot.org/rdf
Description	Ensembl eukaryotic genome annotation project
See Also	https://www.ensembl.org/

EvolutionaryTraceⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/EvolutionaryTrace`
Is Defined By	http://nextprot.org/rdf
Description	Relative evolutionary importance of amino acids within a protein sequence
See Also	http://lichtargelab.org/software/ETserver

ExpressionAtlasⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/ExpressionAtlas`
Is Defined By	http://nextprot.org/rdf
Description	ExpressionAtlas, Differential and Baseline Expression
See Also	https://www.ebi.ac.uk/gxa

FLJⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/FLJ`
Is Defined By	http://nextprot.org/rdf
Description	FLJ identifier

GFP-cDNAⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GFP-cDNA`
Is Defined By	http://nextprot.org/rdf
Description	EMBL/DKFZ GFP-cDNA Localisation Project
See Also	http://gfp-cdna.embl.de

GOAⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GOA`
Is Defined By	http://nextprot.org/rdf
Description	Gene Ontologie Annotation
See Also	http://www.ebi.ac.uk/GOA/

GO_REFⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GO_REF`
Is Defined By	http://nextprot.org/rdf
Description	Gene Ontologie References
See Also	http://www.geneontology.org/cgi-bin/references.cgi

Gene3Dⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Gene3D`
Is Defined By	http://nextprot.org/rdf
Description	Gene3D Structural and Functional Annotation of Protein Families
See Also	http://gene3d.biochem.ucl.ac.uk/Gene3D/

GeneCardsⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GeneCards`
Is Defined By	http://nextprot.org/rdf
Description	GeneCards: human genes, protein and diseases
See Also	https://www.genecards.org/

GeneDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GeneDB`
Is Defined By	http://nextprot.org/rdf
Description	GeneDB pathogen genome database from Sanger Institute
See Also	https://www.genedb.org/

GeneIDⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GeneID`
Is Defined By	http://nextprot.org/rdf
Description	Database of genes from NCBI RefSeq genomes
See Also	https://www.ncbi.nlm.nih.gov/gene

GeneReviewsⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GeneReviews`
Is Defined By	http://nextprot.org/rdf
Description	GeneReviews a resource of expert-authored, peer-reviewed disease descriptions.
See Also	https://www.ncbi.nlm.nih.gov/books/NBK1116

GeneTreeⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GeneTree`
Is Defined By	http://nextprot.org/rdf
Description	Ensembl GeneTree
See Also	https://ensemblgenomes.org

GeneWikiⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GeneWiki`
Is Defined By	http://nextprot.org/rdf
Description	The Gene Wiki collection of pages on human genes and proteins
See Also	https://en.wikipedia.org/wiki/Portal:Gene_Wiki

Genevisibleⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Genevisible`
Is Defined By	http://nextprot.org/rdf
Description	Genevisible search portal to normalized and curated expression data from Genevestigator
See Also	https://genevisible.com/search

GenomeRNAiⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GenomeRNAi`
Is Defined By	http://nextprot.org/rdf
Description	Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens
See Also	http://genomernai.dkfz.de/

GlyConnectⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GlyConnect`
Is Defined By	http://nextprot.org/rdf
Description	GlyConnect protein glycosylation platform
See Also	https://glyconnect.expasy.org

GlyGenⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GlyGen`
Is Defined By	http://nextprot.org/rdf
Description	GlyGen: Computational and Informatics Resources for Glycoscience
See Also	https://glygen.org

GuidetoPHARMACOLOGYⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/GuidetoPHARMACOLOGY`
Is Defined By	http://nextprot.org/rdf
Description	IUPHAR/BPS Guide to PHARMACOLOGY
See Also	https://www.guidetopharmacology.org

HAMAPⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/HAMAP`
Is Defined By	http://nextprot.org/rdf
Description	HAMAP database of protein families
See Also	https://hamap.expasy.org/

HAMAP-Ruleⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/HAMAP-Rule`
Is Defined By	http://nextprot.org/rdf
Description	High-quality Automated and Manual Annotation of Proteins
See Also	https://hamap.expasy.org/

HGNCⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/HGNC`
Is Defined By	http://nextprot.org/rdf
Description	HUGO Gene Nomenclature Committee identifier
See Also	https://www.genenames.org/

HOGENOMⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/HOGENOM`
Is Defined By	http://nextprot.org/rdf
Description	The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms
See Also	http://hogenom.univ-lyon1.fr/

HPAⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/HPA`
Is Defined By	http://nextprot.org/rdf
Description	Human Protein Atlas
See Also	https://www.proteinatlas.org/

HPRDⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/HPRD`
Is Defined By	http://nextprot.org/rdf
Description	Human Proteins Reference Database
See Also	http://www.hprd.org

IDEALⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/IDEAL`
Is Defined By	http://nextprot.org/rdf
Description	Intrinsically Disordered proteins with Extensive Annotations and Literature
See Also	http://idp1.force.cs.is.nagoya-u.ac.jp/IDEAL/

IMAGEⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/IMAGE`
Is Defined By	http://nextprot.org/rdf
Description	IMAGE Consortium clone identifier

IMGT_GENE-DBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/IMGT_GENE-DB`
Is Defined By	http://nextprot.org/rdf
Description	The international ImMunoGeneTics information system
See Also	http://www.imgt.org/genedb

IPIⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/IPI`
Is Defined By	http://nextprot.org/rdf
Description	International Protein Index
See Also	http://www.ebi.ac.uk/IPI

Illuminaⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Illumina`
Is Defined By	http://nextprot.org/rdf
Description	Illumina microarray clone identifier

InParanoidⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/InParanoid`
Is Defined By	http://nextprot.org/rdf
Description	InParanoid: Eukaryotic Ortholog Groups
See Also	https://inparanoid.sbc.su.se/

IntActⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/IntAct`
Is Defined By	http://nextprot.org/rdf
Description	IntAct Molecular Interaction Database
See Also	https://www.ebi.ac.uk/intact/

InterProⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/InterPro`
Is Defined By	http://nextprot.org/rdf
Description	Integrated resource of protein families, domains and functional sites
See Also	https://www.ebi.ac.uk/interpro/

KEGGⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/KEGG`
Is Defined By	http://nextprot.org/rdf
Description	KEGG: Kyoto Encyclopedia of Genes and Genomes
See Also	https://www.genome.jp/kegg/

KEGGPathwayⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/KEGGPathway`
Is Defined By	http://nextprot.org/rdf
Description	KEGG Pathway is a collection of manually drawn pathway maps
See Also	http://www.genome.jp/kegg/pathway.html

KIAAⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/KIAA`
Is Defined By	http://nextprot.org/rdf
Description	Identifier subtype

LOCⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/LOC`
Is Defined By	http://nextprot.org/rdf
Description	Entrez Gene symbol
See Also	http://www.ncbi.nlm.nih.gov/gene

MEROPSⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MEROPS`
Is Defined By	http://nextprot.org/rdf
Description	MEROPS protease database
See Also	https://www.ebi.ac.uk/merops/

MGCⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MGC`
Is Defined By	http://nextprot.org/rdf
Description	Identifier subtype

MGIⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MGI`
Is Defined By	http://nextprot.org/rdf
Description	Mouse genome database (MGD) from Mouse Genome Informatics (MGI)
See Also	http://www.informatics.jax.org/

MIMⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MIM`
Is Defined By	http://nextprot.org/rdf
Description	Online Mendelian Inheritance in Man (OMIM)
See Also	https://www.omim.org/

MINTⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MINT`
Is Defined By	http://nextprot.org/rdf
Description	Molecular INTeraction database
See Also	https://mint.bio.uniroma2.it/

MalaCardsⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MalaCards`
Is Defined By	http://nextprot.org/rdf
Description	MalaCards human disease database
See Also	https://www.malacards.org

MassIVEⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MassIVE`
Is Defined By	http://nextprot.org/rdf
Description	MassIVE - Mass Spectrometry Interactive Virtual Environment
See Also	https://massive.ucsd.edu/

MaxQBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MaxQB`
Is Defined By	http://nextprot.org/rdf
Description	MaxQB - The MaxQuant DataBase
See Also	http://maxqb.biochem.mpg.de/mxdb/

MetOSiteⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MetOSite`
Is Defined By	http://nextprot.org/rdf
Description	MetOSite database of methionine sulfoxide sites
See Also	https://metosite.uma.es/

MoonDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MoonDB`
Is Defined By	http://nextprot.org/rdf
Description	MoonDB Database of extreme multifunctional and moonlighting proteins
See Also	http://moondb.hb.univ-amu.fr

MoonProtⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/MoonProt`
Is Defined By	http://nextprot.org/rdf
Description	MoonProt database of moonlighting proteins
See Also	http://www.moonlightingproteins.org/

NCBI_Taxonomyⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/NCBI_Taxonomy`
Is Defined By	http://nextprot.org/rdf
Description	NCBI taxonomy database
See Also	http://www.ncbi.nlm.nih.gov/Taxonomy

NIAGADSⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/NIAGADS`
Is Defined By	http://nextprot.org/rdf
Description	NIAGADS Genomics Database
See Also	https://www.niagads.org/genomics/

OGPⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/OGP`
Is Defined By	http://nextprot.org/rdf
Description	USC-OGP 2-DE database
See Also	http://usc_ogp_2ddatabase.cesga.es/cgi-bin/2d/2d.cgi

OMAⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/OMA`
Is Defined By	http://nextprot.org/rdf
Description	Identification of Orthologs from Complete Genome Data
See Also	https://omabrowser.org/

OpenTargetsⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/OpenTargets`
Is Defined By	http://nextprot.org/rdf
Description	Open Targets
See Also	https://platform.opentargets.org/

Orphanetⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Orphanet`
Is Defined By	http://nextprot.org/rdf
Description	Orphanet; a database dedicated to information on rare diseases and orphan drugs
See Also	https://www.orpha.net/consor/cgi-bin/index.php

OrthoDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/OrthoDB`
Is Defined By	http://nextprot.org/rdf
Description	Database of Orthologous Groups
See Also	https://www.orthodb.org

Other sourcesⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Others`
Is Defined By	http://nextprot.org/rdf
Description	Identifier from another source

PANTHERⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PANTHER`
Is Defined By	http://nextprot.org/rdf
Description	The PANTHER Classification System
See Also	http://www.pantherdb.org/

PATRICⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PATRIC`
Is Defined By	http://nextprot.org/rdf
Description	Pathosystems Resource Integration Center (PATRIC)
See Also	https://patricbrc.org/

PCDDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PCDDB`
Is Defined By	http://nextprot.org/rdf
Description	The Protein Circular Dichroism Data Bank
See Also	https://pcddb.cryst.bbk.ac.uk/

PDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PDB`
Is Defined By	http://nextprot.org/rdf
Description	Protein Data Bank Europe
See Also	https://www.ebi.ac.uk/pdbe/

PDBsumⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PDBsum`
Is Defined By	http://nextprot.org/rdf
Description	PDBsum; at-a-glance overview of macromolecular structures
See Also	https://www.ebi.ac.uk/pdbsum/

PIRⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PIR`
Is Defined By	http://nextprot.org/rdf
Description	Protein Information Resource (PIR) identifier
See Also	https://proteininformationresource.org/

PIRNRⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PIRNR`
Is Defined By	http://nextprot.org/rdf
Description	PIR Name Rule
See Also	http://www.uniprot.org/

PIRSFⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PIRSF`
Is Defined By	http://nextprot.org/rdf
Description	PIRSF; a whole-protein classification database
See Also	https://proteininformationresource.org/pirwww/dbinfo/pirsf.shtml

PIRSRⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PIRSR`
Is Defined By	http://nextprot.org/rdf
Description	PIRSF site rule system
See Also	http://pir.georgetown.edu

PRIDEⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PRIDE`
Is Defined By	http://nextprot.org/rdf
Description	PRoteomics IDEntifications database
See Also	https://www.ebi.ac.uk/pride

PRINTSⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PRINTS`
Is Defined By	http://nextprot.org/rdf
Description	Protein Motif fingerprint database; a protein domain database
See Also	http://www.bioinf.manchester.ac.uk/dbbrowser/PRINTS/

PROⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PRO`
Is Defined By	http://nextprot.org/rdf
Description	Protein Ontology
See Also	https://proconsortium.org/

PROSITEⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PROSITE`
Is Defined By	http://nextprot.org/rdf
Description	PROSITE; a protein domain and family database
See Also	https://prosite.expasy.org/

PROSITE-ProRuleⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PROSITE-ProRule`
Is Defined By	http://nextprot.org/rdf
Description	ProRule section of PROSITE
See Also	https://prosite.expasy.org/

PathwayCommonsⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PathwayCommons`
Is Defined By	http://nextprot.org/rdf
Description	Pathway Commons web resource for biological pathway data
See Also	http://www.pathwaycommons.org

PaxDbⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PaxDb`
Is Defined By	http://nextprot.org/rdf
Description	PaxDb, a database of protein abundance averages across all three domains of life
See Also	https://pax-db.org

PeptideAtlasⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PeptideAtlas`
Is Defined By	http://nextprot.org/rdf
Description	PeptideAtlas
See Also	http://www.peptideatlas.org

PeroxiBaseⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PeroxiBase`
Is Defined By	http://nextprot.org/rdf
Description	PeroxiBase, a peroxidase database
See Also	http://peroxibase.toulouse.inra.fr/

Pfamⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Pfam`
Is Defined By	http://nextprot.org/rdf
Description	Pfam protein domain database
See Also	https://pfam.xfam.org/

PharmGKBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PharmGKB`
Is Defined By	http://nextprot.org/rdf
Description	The Pharmacogenetics and Pharmacogenomics Knowledge Base
See Also	https://www.pharmgkb.org/

Pharosⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Pharos`
Is Defined By	http://nextprot.org/rdf
Description	Pharos NIH Druggable Genome Knowledgebase
See Also	https://pharos.nih.gov

PhosphoSitePlusⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PhosphoSitePlus`
Is Defined By	http://nextprot.org/rdf
Description	Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.
See Also	https://www.phosphosite.org

PhylomeDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PhylomeDB`
Is Defined By	http://nextprot.org/rdf
Description	Database for complete collections of gene phylogenies
See Also	http://phylomedb.org/

Proteomesⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Proteomes`
Is Defined By	http://nextprot.org/rdf
Description	Proteomes
See Also	https://www.uniprot.org/proteomes

ProteomicsDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/ProteomicsDB`
Is Defined By	http://nextprot.org/rdf
Description	ProteomicsDB: a multi-organism proteome resource
See Also	https://www.proteomicsdb.org/

PubMedⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/PubMed`
Is Defined By	http://nextprot.org/rdf
Description	PubMed site
See Also	http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed

REBASEⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/REBASE`
Is Defined By	http://nextprot.org/rdf
Description	Restriction enzymes and methylases database
See Also	http://rebase.neb.com/rebase/rebase.html

REPRODUCTION-2DPAGEⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/REPRODUCTION-2DPAGE`
Is Defined By	http://nextprot.org/rdf
Description	REPRODUCTION-2DPAGE
See Also	http://reprod.njmu.edu.cn/cgi-bin/2d/2d.cgi

RNActⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/RNAct`
Is Defined By	http://nextprot.org/rdf
Description	RNAct, Protein-RNA interaction predictions for model organisms.
See Also	https://rnact.crg.eu

Reactomeⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Reactome`
Is Defined By	http://nextprot.org/rdf
Description	Reactome - a knowledgebase of biological pathways and processes
See Also	https://reactome.org

RefSeqⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/RefSeq`
Is Defined By	http://nextprot.org/rdf
Description	NCBI Reference Sequences
See Also	https://www.ncbi.nlm.nih.gov/refseq/

Rheaⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/Rhea`
Is Defined By	http://nextprot.org/rdf
Description	Rhea - the annotated database of biochemical reactions
See Also	https://www.rhea-db.org/

RuleBaseⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/RuleBase`
Is Defined By	http://nextprot.org/rdf
Description	UniProtKB annotation rules
See Also	https://services.uniprot.org/supplement/

SABIO-RKⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SABIO-RK`
Is Defined By	http://nextprot.org/rdf
Description	SABIO-RK: Biochemical Reaction Kinetics Database
See Also	http://sabiork.h-its.org/

SAMⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SAM`
Is Defined By	http://nextprot.org/rdf
Description	SAM - Sequence Analysis Methods for automatic annotation
See Also	https://mobidb.bio.unipd.it/

SASBDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SASBDB`
Is Defined By	http://nextprot.org/rdf
Description	Small Angle Scattering Biological Data Bank
See Also	https://www.sasbdb.org/

SFLDⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SFLD`
Is Defined By	http://nextprot.org/rdf
Description	Structure-Function Linkage Database
See Also	http://sfld.rbvi.ucsf.edu/django/

SIGNORⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SIGNOR`
Is Defined By	http://nextprot.org/rdf
Description	SIGNOR Signaling Network Open Resource
See Also	https://signor.uniroma2.it/

SMARTⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SMART`
Is Defined By	http://nextprot.org/rdf
Description	Simple Modular Architecture Research Tool; a protein domain database
See Also	http://smart.embl.de/

SMRⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SMR`
Is Defined By	http://nextprot.org/rdf
Description	SWISS-MODEL Repository - a database of annotated 3D protein structure models
See Also	https://swissmodel.expasy.org/repository/

SRMAtlasⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SRMAtlas`
Is Defined By	http://nextprot.org/rdf
Description	SRMAtlas
See Also	http://www.srmatlas.org

STRINGⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/STRING`
Is Defined By	http://nextprot.org/rdf
Description	STRING: functional protein association networks
See Also	https://string-db.org/

SUPFAMⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SUPFAM`
Is Defined By	http://nextprot.org/rdf
Description	Superfamily database of structural and functional annotation
See Also	https://supfam.org

SWISS-2DPAGEⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SWISS-2DPAGE`
Is Defined By	http://nextprot.org/rdf
Description	Two-dimensional polyacrylamide gel electrophoresis database from the Geneva University Hospital
See Also	https://world-2dpage.expasy.org/swiss-2dpage/

SignaLinkⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SignaLink`
Is Defined By	http://nextprot.org/rdf
Description	SignaLink: a signaling pathway resource with multi-layered regulatory networks
See Also	http://signalink.org/

SwissLipidsⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SwissLipids`
Is Defined By	http://nextprot.org/rdf
Description	SwissLipids knowledge resource for lipid biology
See Also	https://www.swisslipids.org

SwissPalmⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/SwissPalm`
Is Defined By	http://nextprot.org/rdf
Description	SwissPalm database of S-palmitoylation events
See Also	https://swisspalm.org

TCDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/TCDB`
Is Defined By	http://nextprot.org/rdf
Description	Transport Classification Database
See Also	http://www.tcdb.org/

TIGRFAMsⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/TIGRFAMs`
Is Defined By	http://nextprot.org/rdf
Description	TIGRFAMs; a protein family database
See Also	https://www.ncbi.nlm.nih.gov/genome/annotation_prok/tigrfams/

TopDownProteomicsⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/TopDownProteomics`
Is Defined By	http://nextprot.org/rdf
Description	Consortium for Top Down Proteomics
See Also	http://repository.topdownproteomics.org/

TreeFamⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/TreeFam`
Is Defined By	http://nextprot.org/rdf
Description	TreeFam database of animal gene trees
See Also	http://www.treefam.org

UCD-2DPAGEⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/UCD-2DPAGE`
Is Defined By	http://nextprot.org/rdf
Description	University College Dublin 2-DE Proteome Database
See Also	https://proteomics-portal.ucd.ie/cgi-bin/2d/2d.cgi

UCSCⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/UCSC`
Is Defined By	http://nextprot.org/rdf
Description	UCSC genome browser
See Also	https://genome.ucsc.edu/

UniLectinⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/UniLectin`
Is Defined By	http://nextprot.org/rdf
Description	UniLectin database of carbohydrate-binding proteins
See Also	https://unilectin.eu

UniPathwayⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/UniPathway`
Is Defined By	http://nextprot.org/rdf
Description	UniPathway: a resource for the exploration and annotation of metabolic pathways
See Also	http://www.unipathway.org

UniProtⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/UniProt`
Is Defined By	http://nextprot.org/rdf
Description	UniProt web site
See Also	http://www.uniprot.org/uniprot/

UniProtKBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/UniProtKB`
Is Defined By	http://nextprot.org/rdf
Description	Identifier subtype

VEuPathDBⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/VEuPathDB`
Is Defined By	http://nextprot.org/rdf
Description	Eukaryotic Pathogen, Vector and Host Database Resources
See Also	https://veupathdb.org/veupathdb/app

dbSNPⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/dbSNP`
Is Defined By	http://nextprot.org/rdf
Description	Database of single nucleotide polymorphism
See Also	https://www.ncbi.nlm.nih.gov/SNP/

eggNOGⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/eggNOG`
Is Defined By	http://nextprot.org/rdf
Description	evolutionary genealogy of genes: Non-supervised Orthologous Groups
See Also	http://eggnogdb.embl.de/

gnomADⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/gnomAD`
Is Defined By	http://nextprot.org/rdf
Description	Genome aggregation database
See Also	https://gnomad.broadinstitute.org/

iPTMnetⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/iPTMnet`
Is Defined By	http://nextprot.org/rdf
Description	iPTMnet integrated resource for PTMs in systems biology context
See Also	https://research.bioinformatics.udel.edu/iptmnet/

jPOSTⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/jPOST`
Is Defined By	http://nextprot.org/rdf
Description	jPOST - Japan Proteome Standard Repository/Database
See Also	https://globe.jpostdb.org/

neXtProtⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/neXtProt`
Is Defined By	http://nextprot.org/rdf
Description	neXtProt; the human protein knowledge platform
See Also	https://www.nextprot.org/

neXtProtSubmissionⁿⁱ

Class(es)

Database
owl:Thing

URI	`http://nextprot.org/rdf/db/neXtProtSubmission`
Is Defined By	http://nextprot.org/rdf
Description	neXtProt submission; the human protein knowledge platform, publication of type submission part
See Also	http://www.nextprot.org/

ARUK-UCLⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/ARUK-UCL`
Is Defined By	http://nextprot.org/rdf
Description	Alzheimers Research Gene Ontology Initiative (Alzheimer's research UK).
See Also	http://www.ucl.ac.uk/functional-gene-annotation/neurological

AgBaseⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/AgBase`
Is Defined By	http://nextprot.org/rdf
Description	AgBase is a curated resource for functional analysis of agricultural plant and animal gene products.
See Also	http://agbase.msstate.edu/

Alzheimers_University_of_Torontoⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/Alzheimers_University_of_Toronto`
Is Defined By	http://nextprot.org/rdf
Description	Alzheimers Project at University of Toronto
See Also	http://www.ims.utoronto.ca/Page4.aspx

BHF-UCLⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/BHF-UCL`
Is Defined By	http://nextprot.org/rdf
Description	British Heart Foundation - University College London
See Also	http://wiki.geneontology.org/index.php/BHF-UCL

Bgeeⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/Bgee`
Is Defined By	http://nextprot.org/rdf
Description	Information imported from dataBase for Gene Expression Evolution

CACAOⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/CACAO`
Is Defined By	http://nextprot.org/rdf
Description	Community Assessment of Community Annotation with Ontologies
See Also	http://gowiki.tamu.edu/wiki/index.php/Category:CACAO

CAFAⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/CAFA`
Is Defined By	http://nextprot.org/rdf
Description	Critical Assessment of Protein Function Annotation.
See Also	http://biofunctionprediction.org/cafa/

Cellosaurusⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/Cellosaurus`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by neXtProt from the Cellosaurus

ComplexPortalⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/ComplexPortal`
Is Defined By	http://nextprot.org/rdf
Description	A Manually curated, encyclopaedic resource of macromolecular complexes from a number of key model organisms
See Also	https://www.ebi.ac.uk/complexportal

Cosmicⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/Cosmic`
Is Defined By	http://nextprot.org/rdf
Description	Catalogue Of Somatic Mutations In Cancer
See Also	http://www.sanger.ac.uk/genetics/CGP/cosmic/

DFLATⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/DFLAT`
Is Defined By	http://nextprot.org/rdf
Description	Developmental FunctionaL Annotation at Tufts
See Also	http://dflat.cs.tufts.edu/data.htm

DrugBankⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/DrugBank`
Is Defined By	http://nextprot.org/rdf
Description	Drug and drug target database
See Also	http://www.drugbank.ca/

Dypⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/Dyp`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted form the Dyp database

ENYOⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/ENYO`
Is Defined By	http://nextprot.org/rdf
Description	ENYO Pharma, a clinical stage Biotech with a unique drug discovery engine inspired by viruses
See Also	http://www.enyopharma.com/

Ensemblⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/Ensembl`
Is Defined By	http://nextprot.org/rdf
Description	Information imported from Ensembl
See Also	http://www.ensembl.org

FlyBaseⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/FlyBase`
Is Defined By	http://nextprot.org/rdf
Description	A database for Drosophila genetics and molecular biology.
See Also	http://flybase.org/

GDBⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/GDB`
Is Defined By	http://nextprot.org/rdf
Description	Human Genome Database
See Also	http://www.gdb.org

GFP-cDNA@EMBLⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/GFP-cDNAEMBL`
Is Defined By	http://nextprot.org/rdf
Description	GFP-cDNA Localisation Project (EMBL)

GOCⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/GOC`
Is Defined By	http://nextprot.org/rdf
Description	inferred annotations from GO OBO v1.2
See Also	http://www.geneontology.org

GO_centralⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/GO_central`
Is Defined By	http://nextprot.org/rdf
Description	Reference Genome Annotation Project
See Also	http://geneontology.org/page/reference-genome-annotation-project

GlyConnectⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/GlyConnect`
Is Defined By	http://nextprot.org/rdf
Description	A platform integrating sources of information to help characterise the molecular components of protein glycosylation
See Also	https://glyconnect.expasy.org/

HGNCⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/HGNC`
Is Defined By	http://nextprot.org/rdf
Description	HUGO Gene Nomenclature Committee
See Also	http://www.gene.ucl.ac.uk/nomenclature

HGNC-UCLⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/HGNC-UCL`
Is Defined By	http://nextprot.org/rdf
Description	HGNC gene annotation from University College of London
See Also	https://www.ucl.ac.uk/cardiovascular/research/pre-clinical-and-fundamental-science/functional-gene-annotation/hgnc-gene-annotation

Human_protein_atlasⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/Human_protein_atlas`
Is Defined By	http://nextprot.org/rdf
Description	Expression data imported from Human protein atlas
See Also	http://www.proteinatlas.org

IntActⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/IntAct`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by IntAct

InterProⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/InterPro`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by InterPro

KEGG_PTWⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/KEGG_PTW`
Is Defined By	http://nextprot.org/rdf
Description	Link to KEGG pathways

LIFEdbⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/LIFEdb`
Is Defined By	http://nextprot.org/rdf
Description	LIFEdb
See Also	http://www.lifedb.de

MDATA_0004_2011ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MDATA_0004_2011`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the submission MDATA_0004_2011

MDATA_0023_2012ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MDATA_0023_2012`
Is Defined By	http://nextprot.org/rdf
Description	Proteomics information extracted from the submission MDATA_0023_2012

MDATA_0033_2013ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MDATA_0033_2013`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the submission MDATA_0033_2013

MGIⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MGI`
Is Defined By	http://nextprot.org/rdf
Description	Data from the Mouse orthologs database

MTBbaseⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MTBbase`
Is Defined By	http://nextprot.org/rdf
Description	Collection and Refinement of Physiological Data on Mycobacterium tuberculosis
See Also	http://www.ark.in-berlin.de/Site/MTBbase.html

MassIVEⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE`
Is Defined By	http://nextprot.org/rdf
Description	Human peptide sequences and identifiers from MassIVE
See Also	https://massive.ucsd.edu/

MassIVE_human_Adrenal_Glandⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Adrenal_Gland`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Adrenal Gland

MassIVE_human_Blood_Cellsⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Blood_Cells`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Blood Cells

MassIVE_human_Blood_Plasmaⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Blood_Plasma`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Blood Plasma

MassIVE_human_Blood_Vesselⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Blood_Vessel`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Blood Vessel

MassIVE_human_Boneⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Bone`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Bone

MassIVE_human_Brainⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Brain`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Brain

MassIVE_human_Breastⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Breast`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Breast

MassIVE_human_Cancer_Blood_Cellsⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Blood_Cells`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Blood Cells

MassIVE_human_Cancer_Boneⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Bone`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Bone

MassIVE_human_Cancer_Brainⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Brain`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer, Brain

MassIVE_human_Cancer_Breastⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Breast`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer, Breast

MassIVE_human_Cancer_Cell_Lines_Bloodⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Blood`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines, Blood

MassIVE_human_Cancer_Cell_Lines_Boneⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Bone`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines Bone

MassIVE_human_Cancer_Cell_Lines_Brainⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Brain`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines, Brain

MassIVE_human_Cancer_Cell_Lines_Breastⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Breast`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines, Breast

MassIVE_human_Cancer_Cell_Lines_Colonⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Colon`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines, Colon

MassIVE_human_Cancer_Cell_Lines_Digestive_Systemⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Digestive_System`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines Digestive System

MassIVE_human_Cancer_Cell_Lines_Liverⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Liver`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines, Liver

MassIVE_human_Cancer_Cell_Lines_Lungⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Lung`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines, Lung

MassIVE_human_Cancer_Cell_Lines_Other_Anatomical_Entitiesⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Other_Anatomical_Entities`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines, Other Anatomical Entities

MassIVE_human_Cancer_Cell_Lines_Other_Female_Reproductive_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Other_Female_Reproductive_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines, Other Female Reproductive Organ

MassIVE_human_Cancer_Cell_Lines_Other_Gestational_Structureⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Other_Gestational_Structure`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines, Other Gestational Structure

MassIVE_human_Cancer_Cell_Lines_Ovaryⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Ovary`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines, Ovary

MassIVE_human_Cancer_Cell_Lines_Skinⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Cell_Lines_Skin`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Cell Lines Skin

MassIVE_human_Cancer_Digestive_Systemⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Digestive_System`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Digestive System

MassIVE_human_Cancer_Kidneyⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Kidney`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer, Kidney

MassIVE_human_Cancer_Liverⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Liver`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer, Liver

MassIVE_human_Cancer_Lungⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Lung`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer, Lung

MassIVE_human_Cancer_Other_Male_Reproductive_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Other_Male_Reproductive_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer, Other Male Reproductive Organ

MassIVE_human_Cancer_Ovaryⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Ovary`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer, Ovary

MassIVE_human_Cancer_Skinⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Skin`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer Skin

MassIVE_human_Cancer_Urinary_Bladderⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cancer_Urinary_Bladder`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cancer, Urinary Bladder

MassIVE_human_Cerebrospinal_Fluidⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Cerebrospinal_Fluid`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Cerebrospinal Fluid

MassIVE_human_Digestive_Systemⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Digestive_System`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Digestive System

MassIVE_human_Eyeⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Eye`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Eye

MassIVE_human_Heartⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Heart`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Heart

MassIVE_human_Kidneyⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Kidney`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Kidney

MassIVE_human_Liverⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Liver`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Liver

MassIVE_human_Lungⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Lung`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Lung

MassIVE_human_Muscleⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Muscle`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Muscle

MassIVE_human_Non_Cancer_Cell_Linesⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Non_Cancer_Cell_Lines`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Non Cancer Cell Lines

MassIVE_human_Olfactory_Systemⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Olfactory_System`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Olfactory System

MassIVE_human_Oocyteⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Oocyte`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Oocyte

MassIVE_human_Other_Anatomical_Entitiesⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Other_Anatomical_Entities`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Other Anatomical Entities

MassIVE_human_Other_Female_Reproductive_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Other_Female_Reproductive_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Other Female Reproductive Organ

MassIVE_human_Other_Gestational_Structureⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Other_Gestational_Structure`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Other Gestational Structure

MassIVE_human_Other_Male_Reproductive_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Other_Male_Reproductive_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Other Male Reproductive Organ

MassIVE_human_Other_Respiratory_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Other_Respiratory_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Other Respiratory Organ

MassIVE_human_Ovaryⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Ovary`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Ovary

MassIVE_human_Pancreasⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Pancreas`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Pancreas

MassIVE_human_Pituitary_Glandⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Pituitary_Gland`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Pituitary Gland

MassIVE_human_Placentaⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Placenta`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Placenta

MassIVE_human_Skinⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Skin`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Skin

MassIVE_human_Spermⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Sperm`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Sperm

MassIVE_human_Spleenⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Spleen`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Spleen

MassIVE_human_Testisⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Testis`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Testis

MassIVE_human_Thyroid_Glandⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Thyroid_Gland`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Thyroid Gland

MassIVE_human_Ureterⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Ureter`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Ureter

MassIVE_human_Urinary_Bladderⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Urinary_Bladder`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Urinary Bladder

MassIVE_human_Urineⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/MassIVE_human_Urine`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by MassIVE, project Urine

NTNU_SBⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/NTNU_SB`
Is Defined By	http://nextprot.org/rdf
Description	NTNU_SB ontology

NextProtⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/NextProt`
Is Defined By	http://nextprot.org/rdf
Description	Information generated automacally or manually by neXtProt

Orphanetⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/Orphanet`
Is Defined By	http://nextprot.org/rdf
Description	Orphanet; a database dedicated to information on rare diseases and orphan drugs
See Also	http://www.orpha.net/consor/cgi-bin/home.php?Lng=GB

PINCⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PINC`
Is Defined By	http://nextprot.org/rdf
Description	Proteome Inc.

PMID_20140087ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_20140087`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 20140087

PMID_20570859ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_20570859`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 20570859

PMID_20687582ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_20687582`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 20687582

PMID_20797634ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_20797634`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 20797634

PMID_20972266ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_20972266`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 20972266

PMID_21139048ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_21139048`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 21139048

PMID_21645671ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_21645671`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 21645671

PMID_21890473ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_21890473`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 21890473

PMID_22148984ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_22148984`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 22148984

PMID_22865923ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_22865923`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 22865923

PMID_23236377ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_23236377`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 23236377

PMID_23266961ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_23266961`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 23266961

PMID_23584533ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_23584533`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 23584533

PMID_23955771ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_23955771`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 23955771

PMID_24129315ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_24129315`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 24129315

PMID_25038526ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_25038526`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 25038526

PMID_25218447ⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PMID_25218447`
Is Defined By	http://nextprot.org/rdf
Description	Information extracted from the PubMed publication 25218447

ParkinsonsUK-UCLⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/ParkinsonsUK-UCL`
Is Defined By	http://nextprot.org/rdf
Description	Parkinsons Disease Gene Ontology Initiative

PeptideAtlasⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas`
Is Defined By	http://nextprot.org/rdf
Description	Human peptide sequences and identifiers from PeptideAtlas

PeptideAtlas_human_Adrenal_Glandⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Adrenal_Gland`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Adrenal Gland

PeptideAtlas_human_Blood_Cellsⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Blood_Cells`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Blood Cells

PeptideAtlas_human_Blood_Plasmaⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Blood_Plasma`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Blood Plasma

PeptideAtlas_human_Brainⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Brain`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Brain

PeptideAtlas_human_Breastⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Breast`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Breast

PeptideAtlas_human_Cancer_Adrenal_Glandⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Adrenal_Gland`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Adrenal Gland

PeptideAtlas_human_Cancer_Brainⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Brain`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Brain

PeptideAtlas_human_Cancer_Breastⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Breast`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Breast

PeptideAtlas_human_Cancer_Cell_Lines_Bloodⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Blood`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Blood

PeptideAtlas_human_Cancer_Cell_Lines_Boneⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Bone`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Bone

PeptideAtlas_human_Cancer_Cell_Lines_Brainⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Brain`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Brain

PeptideAtlas_human_Cancer_Cell_Lines_Breastⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Breast`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Breast

PeptideAtlas_human_Cancer_Cell_Lines_Digestive_Systemⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Digestive_System`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Digestive System

PeptideAtlas_human_Cancer_Cell_Lines_Kidneyⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Kidney`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Kidney

PeptideAtlas_human_Cancer_Cell_Lines_Liverⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Liver`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Liver

PeptideAtlas_human_Cancer_Cell_Lines_Lungⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Lung`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Lung

PeptideAtlas_human_Cancer_Cell_Lines_Other_Anatomical_Entitiesⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Other_Anatomical_Entities`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Other Anatomical Entities

PeptideAtlas_human_Cancer_Cell_Lines_Other_Female_Reproductive_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Other_Female_Reproductive_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Other Female Reproductive Organ

PeptideAtlas_human_Cancer_Cell_Lines_Other_Male_Reproductive_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Other_Male_Reproductive_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Other Male Reproductive Organ

PeptideAtlas_human_Cancer_Cell_Lines_Ovaryⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Ovary`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Ovary

PeptideAtlas_human_Cancer_Cell_Lines_Pancreasⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Pancreas`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Pancreas

PeptideAtlas_human_Cancer_Cell_Lines_Skinⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Skin`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Skin

PeptideAtlas_human_Cancer_Cell_Lines_Urinary_Bladderⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Cell_Lines_Urinary_Bladder`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer Cell Lines, Urinary Bladder

PeptideAtlas_human_Cancer_Digestive_Systemⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Digestive_System`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Digestive System

PeptideAtlas_human_Cancer_Kidneyⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Kidney`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Kidney

PeptideAtlas_human_Cancer_Liverⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Liver`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Liver

PeptideAtlas_human_Cancer_Lungⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Lung`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Lung

PeptideAtlas_human_Cancer_Other_Anatomical_Entitiesⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Other_Anatomical_Entities`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Other Anatomical Entities

PeptideAtlas_human_Cancer_Other_Female_Reproductive_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Other_Female_Reproductive_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Other Female Reproductive Organ

PeptideAtlas_human_Cancer_Other_Male_Reproductive_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Other_Male_Reproductive_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Other Male Reproductive Organ

PeptideAtlas_human_Cancer_Ovaryⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Ovary`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Ovary

PeptideAtlas_human_Cancer_Pancreasⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Pancreas`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Pancreas

PeptideAtlas_human_Cancer_Skinⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Skin`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Skin

PeptideAtlas_human_Cancer_Urinary_Bladderⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_Urinary_Bladder`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer, Urinary Bladder

PeptideAtlas_human_Cancer_and_Non_Cancer_Cell_Linesⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cancer_and_Non_Cancer_Cell_Lines`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cancer and Non Cancer Cell Lines

PeptideAtlas_human_Cerebrospinal_Fluidⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Cerebrospinal_Fluid`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Cerebrospinal Fluid

PeptideAtlas_human_Digestive_Systemⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Digestive_System`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Digestive System

PeptideAtlas_human_Eyeⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Eye`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Eye

PeptideAtlas_human_Heartⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Heart`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Heart

PeptideAtlas_human_Kidneyⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Kidney`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Kidney

PeptideAtlas_human_Liverⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Liver`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Liver

PeptideAtlas_human_Lungⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Lung`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Lung

PeptideAtlas_human_Muscleⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Muscle`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Muscle

PeptideAtlas_human_Non_Cancer_Cell_Linesⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Non_Cancer_Cell_Lines`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Non Cancer Cell Lines

PeptideAtlas_human_Olfactory_Systemⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Olfactory_System`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Olfactory System

PeptideAtlas_human_Oocyteⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Oocyte`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Oocyte

PeptideAtlas_human_Other_Anatomical_Entitiesⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Other_Anatomical_Entities`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Other Anatomical Entities

PeptideAtlas_human_Other_Female_Reproductive_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Other_Female_Reproductive_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Other Female Reproductive Organ

PeptideAtlas_human_Other_Gestational_Structureⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Other_Gestational_Structure`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Other Gestational Structure

PeptideAtlas_human_Other_Male_Reproductive_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Other_Male_Reproductive_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Other Male Reproductive Organ

PeptideAtlas_human_Other_Respiratory_Organⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Other_Respiratory_Organ`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Other Respiratory Organ

PeptideAtlas_human_Ovaryⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Ovary`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Ovary

PeptideAtlas_human_Pancreasⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Pancreas`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Pancreas

PeptideAtlas_human_Pituitary_Glandⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Pituitary_Gland`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Pituitary Gland

PeptideAtlas_human_Placentaⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Placenta`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Placenta

PeptideAtlas_human_Skinⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Skin`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Skin

PeptideAtlas_human_Spermⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Sperm`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Sperm

PeptideAtlas_human_Spleenⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Spleen`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Spleen

PeptideAtlas_human_Testisⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Testis`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Testis

PeptideAtlas_human_Thyroid_Glandⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Thyroid_Gland`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Thyroid Gland

PeptideAtlas_human_Ureterⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Ureter`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Ureter

PeptideAtlas_human_Urinary_Bladderⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Urinary_Bladder`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Urinary Bladder

PeptideAtlas_human_Urineⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_Urine`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project Urine

PeptideAtlas_human_phosphoproteomeⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/PeptideAtlas_human_phosphoproteome`
Is Defined By	http://nextprot.org/rdf
Description	Information generated by PeptideAtlas, project human phosphoproteome

RHEAⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/RHEA`
Is Defined By	http://nextprot.org/rdf
Description	RHEA
See Also	https://www.rhea-db.org/

Reactomeⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/Reactome`
Is Defined By	http://nextprot.org/rdf
Description	Reactome - a knowledgebase of biological pathways and processes
See Also	http://www.reactome.org/

SGDⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/SGD`
Is Defined By	http://nextprot.org/rdf
Description	Saccharomyces Genome Database
See Also	http://www.yeastgenome.org/

SRMAtlasⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/SRMAtlas`
Is Defined By	http://nextprot.org/rdf
Description	Human peptide sequences and identifiers from SRMAtlas

SYSCILIA_CCNETⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/SYSCILIA_CCNET`
Is Defined By	http://nextprot.org/rdf
Description	A systems biology approach to dissect cilia function. Imported from GOA.
See Also	http://syscilia.org/

SynGOⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/SynGO`
Is Defined By	http://nextprot.org/rdf
Description	Synapse Gene Ontology and Annotation Initiative.
See Also	http://www.geneontology.org/page/syngo-synapse-biology

SynGO-UCLⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/SynGO-UCL`
Is Defined By	http://nextprot.org/rdf
Description	The Synapse Gene Ontology and Annotation Initiative at UCL.
See Also	http://www.geneontology.org/page/syngo-synapse-biology

TCDBⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/TCDB`
Is Defined By	http://nextprot.org/rdf
Description	Transport Classification Database
See Also	http://www.tcdb.org/

Uniprotⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/Uniprot`
Is Defined By	http://nextprot.org/rdf
Description	Information imported from Uniprot
See Also	http://www.uniprot.org

WBⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/WB`
Is Defined By	http://nextprot.org/rdf
Description	A comprehensive resource for genetics, genomics and biology of C. elegans and related nematodes
See Also	https://www.wormbase.org

YuBioLabⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/YuBioLab`
Is Defined By	http://nextprot.org/rdf
Description	Center for Bioinformatics and Genomics Systems Engineering (CBGSE), Department of Electrical and Computer Engineering, Texas A&M University
See Also	https://yubiolab.wordpress.com/

dbSNPⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/dbSNP`
Is Defined By	http://nextprot.org/rdf
Description	Short genetic variations database
See Also	file:///Users/pmichel/Documents/workspace-mars/nextprot-scripts/src/polish-rdf/www.ncbi.nlm.nih.gov/SNP/

dictyBaseⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/dictyBase`
Is Defined By	http://nextprot.org/rdf
Description	Dictyostelium discoideum
See Also	http://dictybase.org/

gnomADⁿⁱ

Class(es)

Source
owl:Thing

URI	`http://nextprot.org/rdf/source/gnomAD`
Is Defined By	http://nextprot.org/rdf
Description	Genome aggregation database
See Also	https://gnomad.broadinstitute.org/

URI	`http://nextprot.org/rdf#assignedBy`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence to its source
Domain(s)	Evidence^c
Range(s)	Source^c

URI	`http://nextprot.org/rdf#accession`
Is Defined By	http://nextprot.org/rdf
Description	Links a cross-reference or an identifier to a string uniquely identifying it in its source database
Domain(s)	(Cross reference^c or Identifier^c)
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#alleleCount`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence for a variant (allele) to its count in a population
Domain(s)	Evidence^c
Range(s)	xsd:integer^c

URI	`http://nextprot.org/rdf#alleleFrequency`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence for a variant (allele) to its frequency in a population
Domain(s)	Evidence^c
Range(s)	xsd:double^c

URI	`http://nextprot.org/rdf#alleleNumber`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence for a variant (allele) to the total number of alleles assessed in a population
Domain(s)	Evidence^c
Range(s)	xsd:integer^c

URI	`http://nextprot.org/rdf#antibodyName`
Is Defined By	http://nextprot.org/rdf
Description	Links an antibody mapping annotation to the antibody name
Domain(s)	Antibody mapping^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#antibodyUniqueness`
Is Defined By	http://nextprot.org/rdf
Description	Links an antibody mapping annotation to its unicity, i.e. whether it maps uniquely to a protein entry or not
Domain(s)	Antibody mapping^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#band`
Is Defined By	http://nextprot.org/rdf
Description	Links a gene to a chromosomal band
Domain(s)	Gene^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#begin`
Is Defined By	http://nextprot.org/rdf
Description	Links a gene to the position on the chromosome marking the beginning of the gene
Domain(s)	Gene^c
Range(s)	xsd:integer^c

URI	`http://nextprot.org/rdf#category`
Is Defined By	http://nextprot.org/rdf
Description	Links a database to its category
Domain(s)	Database^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#chain`
Is Defined By	http://nextprot.org/rdf
Description	Links a sequence to a chain
Domain(s)	Protein sequence^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#chromosome`
Is Defined By	http://nextprot.org/rdf
Description	Links a gene to a chromosome
Domain(s)	Gene^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#city`
Is Defined By	http://nextprot.org/rdf
Description	Links a publication to a city where it was published
Domain(s)	Publication^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#end`
Is Defined By	http://nextprot.org/rdf
Description	Links a gene to the position on the chromosome marking the end of the gene or a positional annotation with the end of the positional feature
Domain(s)	(Positional annotation^c or Gene^c)
Range(s)	xsd:integer^c

URI	`http://nextprot.org/rdf#entryAnnotationId`
Is Defined By	http://nextprot.org/rdf
Description	Unique link between an entry and an annotation
Domain(s)	(General Annotation^c or Positional annotation^c)
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#expressionScore`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence to an expression score
Domain(s)	Evidence^c
Range(s)	xsd:double^c

URI	`http://nextprot.org/rdf#firstPage`
Is Defined By	http://nextprot.org/rdf
Description	Links a publication to the first page number
Domain(s)	Publication^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#from`
Is Defined By	http://nextprot.org/rdf
Description	Links a publication to a PMID or DOI cross reference
Domain(s)	Publication^c
Range(s)	Xref^c

URI	`http://nextprot.org/rdf#hgvs`
Is Defined By	http://nextprot.org/rdf
Description	Links a variant or a mutagenesis annotation to a HGVS name
Domain(s)	(Mutagenesis^c or Variant^c)
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#homozygoteCount`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence for a variant (allele) to its homozygote count in a population
Domain(s)	Evidence^c
Range(s)	xsd:integer^c

neXtProt ontology

Metadata

Description

Table of Contents

Classes ↑

Absorption maxc # Classes

Absorption notec # Classes

Active sitec # Classes

Activity regulationc # Classes

Allergenc # Classes

Allergen namec # Classes

Annotationc # Classes

Antibody mappingc # Classes

Beta strandc # Classes

Bgee developmental stage termc # Classes

Binary interactionc # Classes

Binding sitec # Classes

Biophysicochemical propertyc # Classes

CD Antigen namec # Classes

Calcium-binding regionc # Classes

Catalytic activityc # Classes

Cautionc # Classes

Cellular componentc # Classes

Cleavage sitec # Classes

Cleaved region namec # Classes

Cofactorc # Classes

Cofactor informationc # Classes

Coiled-coil regionc # Classes

Compositionally biased regionc # Classes

Consortiumc # Classes

Cross-linkc # Classes

Databasec # Classes

Developmental stage expression informationc # Classes

Diseasec # Classes

Disease-related variantc # Classes

Disulfide bondc # Classes

DNA-binding regionc # Classes

Domainc # Classes

Domain informationc # Classes

Electrophysiological parameterc # Classes

Proteinc # Classes

Enzyme classificationc # Classes

Enzyme classification numberc # Classes

Enzyme classification namec # Classes

Evidencec # Classes

Evidence code termc # Classes

Experimental contextc # Classes

Expressionc # Classes

Expression informationc # Classes

Expression profilec # Classes

Family namec # Classes

Functionc # Classes

Function informationc # Classes

Functional region namec # Classes

Genec # Classes

Gene namec # Classes

General Annotationc # Classes

Glycosylation sitec # Classes

GO biological processc # Classes

GO biological process termc # Classes

GO cellular componentc # Classes

GO cellular component termc # Classes

GO molecular functionc # Classes

GO molecular function termc # Classes

GO qualifierc # Classes

Helixc # Classes

Protein record historyc # Classes

Identifierc # Classes

Inductionc # Classes

Initiator methioninec # Classes

Interacting regionc # Classes

Interactionc # Classes

Interaction informationc # Classes

Interaction mappingc # Classes

International Non proprietary Namec # Classes

Intramembrane regionc # Classes

Isoformc # Classes

Protein isoform namec # Classes

Kinetic KMc # Classes

Kinetic notec # Classes

Absorption max^c # Classes

Absorption note^c # Classes

Active site^c # Classes

Activity regulation^c # Classes

Allergen^c # Classes

Allergen name^c # Classes

Annotation^c # Classes

Antibody mapping^c # Classes

Beta strand^c # Classes

Bgee developmental stage term^c # Classes

Binary interaction^c # Classes

Binding site^c # Classes

Biophysicochemical property^c # Classes

CD Antigen name^c # Classes

Calcium-binding region^c # Classes

Catalytic activity^c # Classes

Caution^c # Classes

Cellular component^c # Classes

Cleavage site^c # Classes

Cleaved region name^c # Classes

Cofactor^c # Classes

Cofactor information^c # Classes

Coiled-coil region^c # Classes

Compositionally biased region^c # Classes

Consortium^c # Classes

Cross-link^c # Classes

Database^c # Classes

Developmental stage expression information^c # Classes

Disease^c # Classes

Disease-related variant^c # Classes

Disulfide bond^c # Classes

DNA-binding region^c # Classes

Domain^c # Classes

Domain information^c # Classes

Electrophysiological parameter^c # Classes

Protein^c # Classes

Enzyme classification^c # Classes

Enzyme classification number^c # Classes

Enzyme classification name^c # Classes

Evidence^c # Classes

Evidence code term^c # Classes

Experimental context^c # Classes

Expression^c # Classes

Expression information^c # Classes

Expression profile^c # Classes

Family name^c # Classes

Function^c # Classes

Function information^c # Classes

Functional region name^c # Classes

Gene^c # Classes

Gene name^c # Classes

General Annotation^c # Classes

Glycosylation site^c # Classes

GO biological process^c # Classes

GO biological process term^c # Classes

GO cellular component^c # Classes

GO cellular component term^c # Classes

GO molecular function^c # Classes

GO molecular function term^c # Classes

GO qualifier^c # Classes

Helix^c # Classes

Protein record history^c # Classes

Identifier^c # Classes

Induction^c # Classes

Initiator methionine^c # Classes

Interacting region^c # Classes

Interaction^c # Classes

Interaction information^c # Classes

Interaction mapping^c # Classes

International Non proprietary Name^c # Classes

Intramembrane region^c # Classes

Isoform^c # Classes

Protein isoform name^c # Classes

Kinetic KM^c # Classes

Kinetic note^c # Classes

Kinetic Vmax^c # Classes

Large scale publication^c # Classes

Lipid moiety-binding region^c # Classes

Mammalian phenotype^c # Classes

Mammalian phenotype term^c # Classes

URI	`http://nextprot.org/rdf#integrated`
Is Defined By	http://nextprot.org/rdf
Description	Links a UniprotHistory or NextprotHistory to the date of integration
Domain(s)	Protein record history^c
Range(s)	xsd:date^c

URI	`http://nextprot.org/rdf#interactionDetectionMethod`
Is Defined By	http://nextprot.org/rdf
Description	Links an evidence for a binary interaction to an interaction detection method
Domain(s)	Evidence^c
Range(s)	PsiMiCv^c

URI	`http://nextprot.org/rdf#isoelectricPoint`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform sequence to an isoelectric point
Domain(s)	Protein sequence^c
Range(s)	xsd:double^c

URI	`http://nextprot.org/rdf#isoformCount`
Is Defined By	http://nextprot.org/rdf
Description	Links a protein entry to the isoform count
Domain(s)	Protein^c
Range(s)	xsd:integer^c

URI	`http://nextprot.org/rdf#issue`
Is Defined By	http://nextprot.org/rdf
Description	Links a publication to an issue number
Domain(s)	Publication^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#journal`
Is Defined By	http://nextprot.org/rdf
Description	Links a publication to a journal
Domain(s)	Publication^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#lastPage`
Is Defined By	http://nextprot.org/rdf
Description	Links a publication to the last page number
Domain(s)	Publication^c
Range(s)	xsd:string^c

URI	`http://nextprot.org/rdf#lastSequenceUpdate`
Is Defined By	http://nextprot.org/rdf
Description	Links a UniprotHistory to the last sequence update date
Domain(s)	UniProt history^c
Range(s)	xsd:date^c

URI	`http://nextprot.org/rdf#length`
Is Defined By	http://nextprot.org/rdf
Description	Links an isoform sequence to a length (no. of amino acids)
Domain(s)	(Gene^c or Protein sequence^c)
Range(s)	xsd:integer^c

URI	`http://nextprot.org/rdf#level`
Is Defined By	http://nextprot.org/rdf
Description	Links a protein existence annotation to its numerical value
Domain(s)	Protein existence^c
Range(s)	xsd:integer^c