---------------------------------------------------------------------------- neXtProt - a comprehensive human-centric discovery platform SIB Swiss Institute of Bioinformatics; Geneva, Switzerland ---------------------------------------------------------------------------- Description: Chromosome Y report Name: nextprot_chromosome_Y Release: 2023-07-11 Assembly: GRCh38 ---------------------------------------------------------------------------- This file lists all neXtProt entries on chromosome Y Total number of entries: 48 Total number of genes: 58 -------------------------------------------------------------------------------------------------------------------------------------------------------- Gene neXtProt Chromosomal Start Stop Coding Protein Prote- Anti- 3D Dise- Iso- Vari- PTMs Description name AC location position position strand existence omics body ase forms ants ________________________________________________________________________________________________________________________________________________________ SRY NX_Q05066 Yp11.2 2786855 2787682 reverse protein level yes no yes yes 1 76 1 Sex-determining region Y protein RPS4Y1 NX_P22090 Yp11.2 2841602 2932000 forward protein level yes yes yes no 1 31 2 40S ribosomal protein S4, Y isoform 1 ZFY NX_P08048 Yp11.2 2935281 2982506 forward protein level yes no yes no 3 160 1 Zinc finger Y-chromosomal protein TGIF2LY NX_Q8IUE0 Yp11.2 3579067 3580041 forward protein level yes no no no 1 70 0 Homeobox protein TGIF2LY PCDH11Y NX_Q9BZA8 Yp11.2 5000226 5742224 forward protein level yes no no yes 4 473 6 Protocadherin-11 Y-linked TSPY2 NX_A6NKD2 Yp11.2 6246223 6249019 forward protein level yes yes no no 1 92 0 Testis-specific Y-encoded protein 2 AMELY NX_Q99218 Yp11.2 6865918 6911752 reverse protein level yes no no no 2 58 0 Amelogenin, Y isoform TBL1Y NX_Q9BQ87 Yp11.2 6910686 7101970 forward protein level yes yes no yes 1 254 4 F-box-like/WD repeat-containing protein TBL1Y PRKY NX_O43930 Yp11.2 7273972 7381548 forward uncertain yes no no yes 1 9 1 Putative serine/threonine-protein kinase PRKY TTTY12 NX_Q9BZ98 Yp11.2 7803996 7810683 forward uncertain no no no no 1 0 0 Putative transcript Y 12 protein TSPY4 NX_P0CV99 Yp11.2 9337464 9340284 forward transcript level yes no no no 1 25 0 Testis-specific Y-encoded protein 4 TSPY8 NX_P0CW00 Yp11.2 9357797 9360599 forward protein level yes no no no 1 43 0 Testis-specific Y-encoded protein 8 TSPY3 NX_P0CV98 Yp11.2 9398421 9401223 forward transcript level yes no no no 1 32 0 Testis-specific Y-encoded protein 3 TSPY1 NX_Q01534 Yp11.2 9466955 9469749 forward protein level yes no no yes 2 80 0 Testis-specific Y-encoded protein 1 TSPY9 NX_A0A494C1R9 Yp11.2 9487267 9490081 forward transcript level yes no no no 1 6 0 Testis-specific Y-encoded protein 9 TSPY10 NX_P0CW01 Yp11.2 9527880 9530682 forward protein level yes no no no 1 12 0 Testis-specific Y-encoded protein 10 SLC9B1P1 NX_A6NJY1 Yq11.21 11340579 11385687 reverse uncertain yes no no no 1 32 0 Putative SLC9B1-like protein SLC9B1P1 USP9Y NX_O00507 Yq11.221 12537650 12860839 forward protein level yes yes no yes 2 496 5 Probable ubiquitin carboxyl-terminal hydrolase FAF-Y DDX3Y NX_O15523 Yq11.221 12904108 12920478 forward protein level yes yes no yes 3 120 18 ATP-dependent RNA helicase DDX3Y UTY NX_O14607 Yq11.221 13234577 13480673 reverse protein level yes no yes no 5 315 7 Histone demethylase UTY TMSB4Y NX_O14604 Yq11.221 13703899 13706024 forward protein level yes no no no 1 12 2 Thymosin beta-4, Y-chromosomal VCY NX_O14598 Yq11.221 13985772 13986473 reverse protein level yes yes no no 1 4 0 Testis-specific basic protein Y 1 VCY NX_O14598 Yq11.221 14056227 14056958 forward protein level yes yes no no 1 4 0 Testis-specific basic protein Y 1 NLGN4Y NX_Q8NFZ3 Yq11.221 14522573 14845654 forward protein level yes no no no 4 251 6 Neuroligin-4, Y-linked XKRY NX_O14609 Yq11.222 17768980 17777400 reverse transcript level no no no no 1 0 0 Testis-specific XK-related protein, Y-linked CDY2A NX_Q9Y6F7 Yq11.222 17878260 17880220 reverse protein level yes yes yes no 1 13 0 Testis-specific chromodomain protein Y 2 CDY2A NX_Q9Y6F7 Yq11.222 18025787 18027746 forward protein level yes yes yes no 1 13 0 Testis-specific chromodomain protein Y 2 XKRY2 NX_A2RUG3 Yq11.222 18128610 18137029 forward transcript level no no no no 1 0 0 Testis-specific XK-related protein, Y-linked 2 HSFY1 NX_Q96LI6 Yq11.222 18546691 18588963 forward protein level yes yes no no 3 8 2 Heat shock transcription factor, Y-linked HSFY2 NX_Q96LI6 Yq11.222 18731440 18773735 reverse protein level yes yes no no 3 8 2 Heat shock transcription factor, Y-linked BCORP1 NX_Q8N888 Yq11.222 19455431 19567092 reverse uncertain no no no no 1 0 0 Putative BCoR-like protein 2 TXLNGY NX_Q9BZA5 Yq11.222 19567313 19606274 forward uncertain yes no no no 1 0 0 Putative gamma-taxilin 2 KDM5D NX_Q9BY66 Yq11.223 19703865 19744939 reverse protein level yes yes yes no 3 382 10 Lysine-specific demethylase 5D TTTY10 NX_Q9BZA0 Yq11.223 20464916 20575519 reverse uncertain no no no no 1 0 0 Putative transcript Y 10 protein EIF1AY NX_O14602 Yq11.223 20575776 20593154 forward protein level yes no no no 1 16 2 Eukaryotic translation initiation factor 1A, Y-chromosomal RPS4Y2 NX_Q8TD47 Yq11.223 20756108 20781032 forward protein level yes no no no 1 83 0 40S ribosomal protein S4, Y isoform 2 PRORY NX_Q9H606 Yq11.223 21382954 21386360 reverse transcript level no no no no 1 0 0 Proline-rich protein, Y-linked RBMY1B NX_A6NDE4 Yq11.223 21511338 21549094 forward transcript level yes no no no 1 2 0 RNA-binding motif protein, Y chromosome, family 1 member B RBMY1A1 NX_P0DJD3 Yq11.223 21511372 21549326 forward protein level yes no yes yes 3 19 0 RNA-binding motif protein, Y chromosome, family 1 member A1 TTTY13 NX_Q9BZ97 Yq11.223 21565092 21605081 reverse uncertain no no no no 1 0 0 Putative transcript Y 13 protein RBMY1D NX_P0C7P1 Yq11.223 21880076 21894526 reverse transcript level yes no no no 2 5 0 RNA-binding motif protein, Y chromosome, family 1 member D RBMY1E NX_A6NEQ0 Yq11.223 21903618 21918042 reverse protein level yes no no no 1 44 0 RNA-binding motif protein, Y chromosome, family 1 member E PRY NX_O14603 Yq11.223 22071756 22096007 reverse protein level no yes no no 2 0 0 PTPN13-like protein, Y-linked RBMY1F NX_Q15415 Yq11.223 22168542 22182982 reverse protein level yes yes no no 2 29 0 RNA-binding motif protein, Y chromosome, family 1 member F/J RBMY1J NX_Q15415 Yq11.223 22403410 22417881 forward protein level yes yes no no 2 29 0 RNA-binding motif protein, Y chromosome, family 1 member F/J PRY NX_O14603 Yq11.223 22490397 22514637 forward protein level no yes no no 2 0 0 PTPN13-like protein, Y-linked BPY2 NX_O14599 Yq11.223 22973819 23005465 forward protein level no no no no 1 0 0 Testis-specific basic protein Y 2 DAZ1 NX_Q9NQZ3 Yq11.223 23129355 23199010 reverse protein level yes no no yes 2 2 0 Deleted in azoospermia protein 1 DAZ2 NX_Q13117 Yq11.223 23219447 23291356 forward protein level yes no no yes 3 20 0 Deleted in azoospermia protein 2 PRYP3 NX_O14603 Yq11.223 23682007 23694527 reverse protein level no yes no no 2 0 0 PTPN13-like protein, Y-linked CDY1B NX_Q9Y6F8 Yq11.23 24045229 24048019 reverse protein level yes no yes no 2 6 0 Testis-specific chromodomain protein Y 1 BPY2B NX_O14599 Yq11.23 24607560 24639207 forward protein level no no no no 1 0 0 Testis-specific basic protein Y 2 DAZ3 NX_Q9NR90 Yq11.23 24763069 24813492 reverse protein level yes no no yes 2 9 0 Deleted in azoospermia protein 3 DAZ4 NX_Q86SG3 Yq11.23 24833843 24907040 forward protein level yes no no yes 2 10 0 Deleted in azoospermia protein 4 BPY2C NX_O14599 Yq11.23 25030901 25062548 reverse protein level no no no no 1 0 0 Testis-specific basic protein Y 2 CDY1 NX_Q9Y6F8 Yq11.23 25622117 25624902 forward protein level yes no yes no 2 6 0 Testis-specific chromodomain protein Y 1 PRYP4 NX_O14603 Yq11.23 25975549 25988069 forward protein level no yes no no 2 0 0 PTPN13-like protein, Y-linked RBMY1C NX_P0DJD4 Yq11.23 - - - protein level yes no no no 1 0 0 RNA-binding motif protein, Y chromosome, family 1 member C ____________________________________________________________________________ Copyrighted by the SIB Swiss Institute of Bioinformatics Distributed under the Creative Commons Attribution 4.0 International Public License (CC BY 4.0) ----------------------------------------------------------------------------